Gene Information

Name : Mesau_02813 (Mesau_02813)
Accession : YP_007304583.1
Strain : Mesorhizobium australicum WSM2073
Genome accession: NC_019973
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2881708 - 2882988 bp
Length : 1281 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase

DNA sequence :
ATGTCCGAACGCATCGCCGTTATAGGCCTGGGATATGTCGGCCTACCGGTAGCCGTGGCGTTTGGGAAGGTTTTCCCGGG
CACGATAGCTTTCGATATCAGCGAACGCCGGATCGAGGAACTGCTTCGCGGCGTTGATCGCACGGGAGAGGTCGACACTG
CGGCGCTCAGGGAATCCTCGATCGTGCTTACGACCGACCGGGAGATGTTAAAAGGCGCGACTTTCTTCATTGTTGCTGTG
CCCACGCCTATCGACATCAACCGTGCTCCCGATCTTGCGCCGTTGAAACTGGCATCGCAGTTTGTCGGTGAAACTGTGAG
CAAGGGCGCAGTCGTCGTTTTCGAATCGACGGTCTATCCGGGCGTGACCGAGGATTTTTGCGGCCCGATCATCGAACATA
TGTCCGGCCTGCGGCATCCTCATGACTTCGCGCTGGGCTACTCGCCTGAAAGGGCAAACCCTGGCGATCAGGAACACTCG
CTGCGACGGGTCATCAAAGTCGTCTCCGGTGAGAATGCCGAGACCCTGGAGCGCGTAGCGAGAGTCTATGGCCAAATCAT
CGACGCCGGCGTCTACCGCGCGGGATCGATCAAGGTGGCCGAAGCAGCGAAGGTTATCGAGAATACGCAACGCGACCTCA
ACATCGCGCTGATGAATGAACTGGCAATGATCTTCGAACGGCTTGATATCCGCACGCAAGATGTCCTCGATGCCGCCTCG
ACAAAATGGAACTTCCTTCCCTTCAAGCCGGGCTTCGTCGGCGGCCACTGCATCAGCGTCGATCCGTATTACCTGACCGC
CAAGGCGGAGGCCGAAGGCTACCACCCACAGATCATCCTCGCTGGCCGCCGCATCAATGACGGCATGGGAGCCTTCGTTG
CCCAACAGATCGTCAAACAGCTGATCCGGTCGGACATACCCGTCAAAGGCGCTTCGGTCGGCATTCTCGGACTGACCTTC
AAGGAAGACGTCCCGGATTTGCGTAACAGCCGCGTTTTCGACATGGTCAAGGAACTAAGACAGTTCGGAATCGTGCCCAA
AGTTCACGATCCTCTTGCAGATACTGAATCCGCTTTACGCGACCATGGCGAGACAATCCTGCCGATTAATGAGATAGGCG
ACTTGCAGGCGCTTGTTTTGGCGGTACCTCACAAGGTTTATCTCACCAGCGAGAGAACGCGTCTTTTTCAAATGATCAAG
CAAGGCGGAACACTGTTCGACATCAAGTCTGCTCTTAAGCCGAACGAGATTCCTGACAGTTTAAAATATTGGAGTCTGTG
A

Protein sequence :
MSERIAVIGLGYVGLPVAVAFGKVFPGTIAFDISERRIEELLRGVDRTGEVDTAALRESSIVLTTDREMLKGATFFIVAV
PTPIDINRAPDLAPLKLASQFVGETVSKGAVVVFESTVYPGVTEDFCGPIIEHMSGLRHPHDFALGYSPERANPGDQEHS
LRRVIKVVSGENAETLERVARVYGQIIDAGVYRAGSIKVAEAAKVIENTQRDLNIALMNELAMIFERLDIRTQDVLDAAS
TKWNFLPFKPGFVGGHCISVDPYYLTAKAEAEGYHPQIILAGRRINDGMGAFVAQQIVKQLIRSDIPVKGASVGILGLTF
KEDVPDLRNSRVFDMVKELRQFGIVPKVHDPLADTESALRDHGETILPINEIGDLQALVLAVPHKVYLTSERTRLFQMIK
QGGTLFDIKSALKPNEIPDSLKYWSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-107 52
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-99 52
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-99 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mesau_02813 YP_007304583.1 nucleotide sugar dehydrogenase VFG0431 Protein 5e-100 52