Gene Information

Name : VPBB_A0641 (VPBB_A0641)
Accession : YP_007300670.1
Strain :
Genome accession: NC_019971
Putative virulence/resistance : Virulence
Product : Accessory colonization factor AcfA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 708774 - 709421 bp
Length : 648 bp
Strand : -
Note : Equivalent to RIMD VPA0695 accessory colonization factor AcfA

DNA sequence : 
ATGAACAAAACACTTCTTGCGTTACTTGTTACCTGCTCAGTTTCGGTATCTGCGGCTCCTTATGTAGGTCTGGAATATGG
ATTAGGCACCGCTGACCATGATTTGGAACCTCACTTTTCAGCTGACAACGTAACACTCAGCCCTGAACTTGAAGATGGTA
TTTTCTCAGGCTTTATCGGTTACGCATTTAATGACAACTGGGCATTGGAACTGGGTTACAGCCAGTTTGACCTTGATGAT
AGTCGCTCAAAAAACCTAGGTATCAAGCCAATCGATGGCAAAGATTACCATCATGAAATGGATTGGGATGCGTCAATCAA
AGCCAAACAAGTGTCGTTGGCTCCAGTGTTTAGCTACGCATTAAGTGATAAATGGACAACAAAATTCAAAGCGGGTCTAA
CTTACACACAATACGACGCCAAGGTTTCTAAACATCAAGAATACGAGCTTGTCGCGAACGACGATGTGGAAATGACCAAC
ACGCTTTTCCATAGCGCGGAGAAAAATAACGAGTTCGGCGCAATGTTCTCTGTGGGTGCGGAATACCAAGTGTTCCCAAA
GCTCACCATTGGCGCAAACGCAAAATACCAACTAGACAGCTACGCAAACACAGCATCCTTTAACGTAGGCACAACTTACT
ACTTTTAA

Protein sequence : 
MNKTLLALLVTCSVSVSAAPYVGLEYGLGTADHDLEPHFSADNVTLSPELEDGIFSGFIGYAFNDNWALELGYSQFDLDD
SRSKNLGIKPIDGKDYHHEMDWDASIKAKQVSLAPVFSYALSDKWTTKFKAGLTYTQYDAKVSKHQEYELVANDDVEMTN
TLFHSAEKNNEFGAMFSVGAEYQVFPKLTIGANAKYQLDSYANTASFNVGTTYYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfA AAA69687.1 accessory colonization factor Virulence VPI Protein 7e-45 42
acfA ACK75666.1 accessory colonization factor AcfA Virulence VPI Protein 1e-44 42
acfA AAA82709.1 AcfA Virulence VPI Protein 7e-45 42
acfA ACK75645.1 accessory colonization factor AcfA Virulence VPI Protein 1e-44 42
acfA ACK75648.1 accessory colonization factor AcfA Virulence VPI Protein 7e-45 42
acfA AAK20771.1 accessory colonization factor AcfA Virulence VPI Protein 7e-45 42
acfA AAK20801.1 accessory colonization factor AcfA Virulence VPI Protein 7e-45 42
acfA ACK75651.1 accessory colonization factor AcfA Virulence VPI Protein 7e-45 42
VC0844 NP_230492.1 accessory colonization factor AcfA Virulence VPI-1 Protein 1e-44 42
acfA ACK75654.1 accessory colonization factor AcfA Virulence VPI Protein 7e-45 42
acfA YP_001216324.1 accessory colonization factor AcfA Virulence VPI-1 Protein 1e-44 42
acfA ACK75663.1 accessory colonization factor AcfA Virulence VPI Protein 7e-45 42
acfA ACK75660.1 accessory colonization factor AcfA Virulence VPI Protein 3e-44 42
acfA ACK75669.1 accessory colonization factor AcfA Virulence VPI Protein 7e-45 42
acfA ACK75657.1 accessory colonization factor AcfA Virulence VPI Protein 1e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A0641 YP_007300670.1 Accessory colonization factor AcfA VFG0103 Protein 4e-45 42