Gene Information

Name : VPBB_A1596 (VPBB_A1596)
Accession : YP_007301625.1
Strain :
Genome accession: NC_019971
Putative virulence/resistance : Resistance
Product : Acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1798950 - 1799609 bp
Length : 660 bp
Strand : +
Note : Equivalent to RIMD VPA1748 chloramphenicol acetyltransferase

DNA sequence : 
ATGAGTGTTTTCGACACGTGGTTAAAAGGTCAAGTCATTAAAGATCACATCACTAATCCCAATATCATCGTTGGCGATTA
CAGCTATTACTCGGGCTTCTATCATCAAAAAAGCTTCGAAGAGCAAGCAGCACGCTACTTGTTGGGTGACCCCGTCACAC
TTCAAGAATGGCAAAGTAGAGAACCCGATAGCATCGACAAATTAATCATTGGCAAGTTTTGTTCCATCGCTTCTGGAGCC
ACCTTCATGATGGCAGGAAACCAAGGTCATCGCATTGACTGGATTTCGACCTTCCCCTTCTCTCCTGAAGAATTTGGAGA
AGACGTACAAGACGGTTTCGAGCGTGCCGGAGACACGGTGGTGGGGAACGATGTTTGGATTGGCAGCGAGGCGATGATCA
TGCCCGGAGTAAACATCGGCGATGGAGCAGTCATCGGAGCACGCGCCGTAGTGACGAAAGATGTCCAACCTTATTCGGTG
GTGGTTGGAAACAACCAAGTCGTACGTCAACGATTCAGCGATAAAGAGATTGAAACTCTACTCAATATCCAATGGTGGAA
CTGGCCAATAGAACACATTAAACAAGCAATGAAAGTAATGTGTAGCAGCCAAGTCGGTGCGCTTGCGGACTACTATCAAG
AGCACATTGTCGATTTGTAG

Protein sequence : 
MSVFDTWLKGQVIKDHITNPNIIVGDYSYYSGFYHQKSFEEQAARYLLGDPVTLQEWQSREPDSIDKLIIGKFCSIASGA
TFMMAGNQGHRIDWISTFPFSPEEFGEDVQDGFERAGDTVVGNDVWIGSEAMIMPGVNIGDGAVIGARAVVTKDVQPYSV
VVGNNQVVRQRFSDKEIETLLNIQWWNWPIEHIKQAMKVMCSSQVGALADYYQEHIVDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 5e-42 54
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 5e-41 53
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 5e-41 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A1596 YP_007301625.1 Acetyltransferase JF268688.1.gene6.p01 Protein 5e-41 56
VPBB_A1596 YP_007301625.1 Acetyltransferase AY123251.gene2.p01 Protein 2e-42 54
VPBB_A1596 YP_007301625.1 Acetyltransferase AF322577.2.gene4.p01 Protein 3e-41 53
VPBB_A1596 YP_007301625.1 Acetyltransferase AY740681.1.gene5.p01 Protein 3e-41 53
VPBB_A1596 YP_007301625.1 Acetyltransferase NC_002516.2.878374.p Protein 3e-39 50
VPBB_A1596 YP_007301625.1 Acetyltransferase CP001581.1.gene990.p Protein 7e-44 44
VPBB_A1596 YP_007301625.1 Acetyltransferase NC_011586.7045146.p0 Protein 4e-24 44
VPBB_A1596 YP_007301625.1 Acetyltransferase AM180355.1.gene2499. Protein 3e-28 41