Gene Information

Name : VPBB_A1517 (VPBB_A1517)
Accession : YP_007301546.1
Strain :
Genome accession: NC_019971
Putative virulence/resistance : Virulence
Product : Ferrichrome ABC transporter (permease) PvuD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1707903 - 1708874 bp
Length : 972 bp
Strand : -
Note : Equivalent to RIMD VPA1653 putative ferrichrome ABC transporter permease

DNA sequence : 
ATGATGAATCAAACCAAACTGATGGCACTGCTTGGGCTTTTGCTGATTGCGTCGTCTCTCACGCTGTTTGTTGGCGCGGC
GAATCTGTCGGCTCAACAGGTTTTTGCATTGTTGTTTTCTTTCTCTGATTCGGACTTTGTGATTCACCAATATCGACTGC
CGAGAATGTTGCTCGCCATTGGCGTGGGCGCTGGGTTAGGGCTGTCAGGCGTTTTAGTGCAAGGCGTCATCCGTAATCCA
CTTGCCTCCCCAGATTTAATGGGGATAAGCGCAGGGGCAGGGCTGGCGGCTACCGCTTGCTTGGTGTTGTATCCGAACGC
GCCGGTGGCAATGTTGCCGATGGTCGCTATGGCGGGAGGTTTGCTTGCTGCAGGCTTTATTGCTGTACTGGCTTATTGGT
CGAAGCCAACACCTGCGCGTTTGGCGCTGATTGGCGTTGCTGTCAGCGCATTTTTAGCCAGCGGTATCGATTTTCTTCTG
ATTGTGCACCCTATCGAAATCAACACGGCGATGGTATGGCTAACCGGCAGTTTGTGGGGACGAAACTGGCAACAAGTGCC
GTTTATTTGGAGTGCTTTATTGCTGCTACTGCCATTGGCGTTTTGGCTGGCTTGGCGGTTAGATGTGATGGGACTGGGAG
AAGAAAGTGCCACTACACTTGGCACGAAACCAAGACAGAACCAAATTCTTGCGTTGATTGCTGCCGTGCTATTGGCGAGC
ATCAGTGTGTCTGTGGCAGGCACGATCAGCTTTGTTGGCCTGCTTGCGCCGCATCTTGCGCGTTTGCTGTTTGGTCACAA
CCACAAGTTATTGATTCCTGCTTCTGCAATCCTTGGCGCGCTGTTGGTGATTTGCGCCGATGGTCTAGCGAGAGGCTTAC
AGCCACCAATTGAGTTGCCAGCGGGTGTGCTGACTTCTGTTATTGGCGCACCATATTTCATTTTTCTTTTGTATCGTTAT
CGAGGTTGGTAA

Protein sequence : 
MMNQTKLMALLGLLLIASSLTLFVGAANLSAQQVFALLFSFSDSDFVIHQYRLPRMLLAIGVGAGLGLSGVLVQGVIRNP
LASPDLMGISAGAGLAATACLVLYPNAPVAMLPMVAMAGGLLAAGFIAVLAYWSKPTPARLALIGVAVSAFLASGIDFLL
IVHPIEINTAMVWLTGSLWGRNWQQVPFIWSALLLLLPLAFWLAWRLDVMGLGEESATTLGTKPRQNQILALIAAVLLAS
ISVSVAGTISFVGLLAPHLARLLFGHNHKLLIPASAILGALLVICADGLARGLQPPIELPAGVLTSVIGAPYFIFLLYRY
RGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 1e-24 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A1517 YP_007301546.1 Ferrichrome ABC transporter (permease) PvuD BAC0163 Protein 8e-25 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A1517 YP_007301546.1 Ferrichrome ABC transporter (permease) PvuD VFG1043 Protein 7e-25 48