Gene Information

Name : VPBB_A1516 (VPBB_A1516)
Accession : YP_007301545.1
Strain :
Genome accession: NC_019971
Putative virulence/resistance : Virulence
Product : Ferrichrome ABC transporter (ATP binding subunit) PvuE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1707136 - 1707900 bp
Length : 765 bp
Strand : -
Note : Equivalent to RIMD VPA1652 iron-dicitrate transporter ATP-binding subunit

DNA sequence : 
ATGTTACGAACGCAGAATTTATCCGTCGCGTACGGCAAACAGACCATCATTCCGGATCTCTCTTTGTCGATTCCTCAAGG
TAAAATTACCGCGCTTGTTGGCCCAAATGGTTGCGGTAAGTCGACACTATTAAAAACCTTGGTACGCATCAATAAACCAG
CTTCTGGCCAAGTGTTGTATGACGACAAACCACTAAGCAGCTACGGTGATAAATGCTTGGCACGCTCGTTGTCTTTGCTG
CCGCAGATTCTTGTCAGTCCTGAAGGTATTACAGTCAGAAAACTGGTCGAATATGGCCGATCGCCTTATCTCTCTCACTG
GGGGCGGTTAAGTCAGCAAGATAAAGCGTTGGTCGAGCAAGCAATGCAAGATACTGGCGTGATTGAGTTTGCTGACAAGC
CAGTTGAATCGTTGTCTGGCGGTCAAAGGCAAAGGGCGTGGATTGCGATGGTAATGGCGCAAGATACCGACGTAGTGATG
CTTGATGAGCCAACCACTTACTTGGATCTCTCTCACCAAGTTGAGCTGATGAAACTCATGAGGCAGATGAACGACAAAGG
CAAAACAGTGGTCGTAGTGTTGCACGATCTAAACCAAGCGTGCCGTTACTGCGATCATTTGGTGGTGTTGGAAAAAGGTC
AGTTAGTCACGCAGGGAACGCCGCAAGAGGTACTGACAGAAGGCATGTTGGCATCGGTGTTTGATTTACAAGCGAGAGTA
TTTAACGATCCAATCTCAGGCACGCCGATGTGTGTGGCGGTGTAG

Protein sequence : 
MLRTQNLSVAYGKQTIIPDLSLSIPQGKITALVGPNGCGKSTLLKTLVRINKPASGQVLYDDKPLSSYGDKCLARSLSLL
PQILVSPEGITVRKLVEYGRSPYLSHWGRLSQQDKALVEQAMQDTGVIEFADKPVESLSGGQRQRAWIAMVMAQDTDVVM
LDEPTTYLDLSHQVELMKLMRQMNDKGKTVVVVLHDLNQACRYCDHLVVLEKGQLVTQGTPQEVLTEGMLASVFDLQARV
FNDPISGTPMCVAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-70 58
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-55 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-52 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-52 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-56 44
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-56 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-55 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-53 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A1516 YP_007301545.1 Ferrichrome ABC transporter (ATP binding subunit) PvuE BAC0164 Protein 7e-71 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A1516 YP_007301545.1 Ferrichrome ABC transporter (ATP binding subunit) PvuE VFG1042 Protein 6e-71 58
VPBB_A1516 YP_007301545.1 Ferrichrome ABC transporter (ATP binding subunit) PvuE VFG0925 Protein 9e-61 47