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Name : VPBB_A1365 (VPBB_A1365) Accession : YP_007301394.1 Strain : Genome accession: NC_019971 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 1536648 - 1538279 bp Length : 1632 bp Strand : + Note : Equivalent to RIMD VPA1495 ABC transporter ATP-binding protein DNA sequence : ATGTCTTCTCAAACCATTCTTTCGGTGAACAACTTGTCTGTCAGCTTTACGACAAACGATGGGATCGTCGATGCAGTAAA GAATGTTAGCTTCGAGCTACAAGCGGGTGAAACGCTGTCTATCGTCGGCGAATCTGGTTCTGGTAAATCAGTTTCCACCA ACGCTTTAATGAAGCTGCTACCAGACAACGCCATTGTCCATCCAGACTCGTCAATCATGTTTGAAGGCGAATCCATTCTG GACAAAACTGAGCGACAAATGCAGCGCATTCGCGGCGATCGCATCGGAATGATATTCCAAGAGCCGATGACTTCACTGAA TCCGTATATGCGGGTCGGTATTCAAGTGGCGGAAGCCATGATGTGTCATCGCTCCGTCAATCAGCGCAAAGCCAAAGAAC GTGTGCTTGAACTGTTTGATTTGGTTCATTTGCCGAACCCGCAACAAGCCTATGATAAGTATCCCCATGAGTTTTCTGGA GGCCAATTACAGCGCATCATGATTGCCATGGCGCTAATTAACGAACCAGACATCTTAATTGCCGATGAGCCGACAACCGC GCTTGACGTTACCGTTCAGGCGGAAGTGCTACTGCTGATTAAAGAGATTCAAGCAAAAATGGGGATGGCTATTTTATTTA TCACCCATGACCTAGGCGTGGTGAAACACTTTGCCGATCGTGTGTTGGTGATGTGCAAAGGTGAGGTCGTTGAAGAAGGC ATCACTGAGCACTTGTTTTCTGATCCTCAGCATGAATACACCAAAATGCTGATTAACTCGATTCCGAAAGGAAGCAAAAC CCCCGTTGATGAGAATGCGTCGGAATTGCTCAACGCTGAAGACATTCGTGTGAAGTTTTTGGTGACGCCTCACTTTATCC CAAGCAAAAACGAGTACTTCGAAGCGGTAAAAGGCATCTCGTTGCGACTGAAACAGGGCGAAACACTAGGCATTGTTGGG GAATCCGGTTCGGGTAAATCCACGTTAGGGCGTGCGTTGATCGGTTTACTACCGTCTACCGGAAAAATTGAGTTTAAAGG TCAAAACATGGCCTCACTCAGCGACAAAGAGCGGTTCGATCTGAAAAAAGACGTACAAATGGTGTTCCAAGATCCATACG GTTCGCTTTCACCACGTATGACCATCGGGGAAATCATCACTGAAGGGTTAACCGTCCACTGGCCATATTTAAACAAGAAA GAACGCATGCAAAAAGCGCGTGATGTTCTGCGCGAAGTACGTTTGGATCCCGCATCAATAAACCGCTATCCGCACGAATT TTCCGGTGGGCAGCGTCAACGTATTGCGATTGCACGAGCCTTGATTTTGGAACCGTCGTTTATCTTGCTTGATGAGCCGA CCTCAGCCTTAGATCGCTCAGTGCAACTCACTGTCATCGATCTTCTCAAAGACTTGCAGAAAAAACACAATATCGGTTAT TTGTTCATAAGCCATGATTTATCAGTGATTAAGGCGCTTTCTGATCGCGTATTAGTGATGCAAAAAGGAGAAGTGATGGA GCAAGGAAGCGCACAAGAGATTTTCCATCACCCAAAAAGTGAGTACACTAGAAAACTGATTGATGCCTCATTTGATCTTG AAAACAATGAAAATCAAAATGATGCTGCTTAG Protein sequence : MSSQTILSVNNLSVSFTTNDGIVDAVKNVSFELQAGETLSIVGESGSGKSVSTNALMKLLPDNAIVHPDSSIMFEGESIL DKTERQMQRIRGDRIGMIFQEPMTSLNPYMRVGIQVAEAMMCHRSVNQRKAKERVLELFDLVHLPNPQQAYDKYPHEFSG GQLQRIMIAMALINEPDILIADEPTTALDVTVQAEVLLLIKEIQAKMGMAILFITHDLGVVKHFADRVLVMCKGEVVEEG ITEHLFSDPQHEYTKMLINSIPKGSKTPVDENASELLNAEDIRVKFLVTPHFIPSKNEYFEAVKGISLRLKQGETLGIVG ESGSGKSTLGRALIGLLPSTGKIEFKGQNMASLSDKERFDLKKDVQMVFQDPYGSLSPRMTIGEIITEGLTVHWPYLNKK ERMQKARDVLREVRLDPASINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIDLLKDLQKKHNIGY LFISHDLSVIKALSDRVLVMQKGEVMEQGSAQEIFHHPKSEYTRKLIDASFDLENNENQNDAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-85 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-85 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 7e-85 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 7e-85 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 6e-104 | 42 |
