Gene Information

Name : VPBB_A0013 (VPBB_A0013)
Accession : YP_007300042.1
Strain :
Genome accession: NC_019971
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 13813 - 14511 bp
Length : 699 bp
Strand : +
Note : Equivalent to RIMD VPA0015 ABC transporter ATP-binding protein

DNA sequence : 
ATGATCGTTTTCAGTCAACTCAGTCGCGATTACACCCTTGGCAGCCAAACCGTACGCGCGTTGCAAGATGTCTCTGGTGA
GGTGTTTGCCGGTGAAATGGTGGCGCTGTGTGGGCCTTCCGGCTCAGGAAAAAGTACCTTACTCAATGTGCTTGGCATGT
TGGATTCACAATATCAAGGTCAGGTAACGTTTGCTGGTCAACCTTACCCGAGCGGACAAATGCAGGCTGCGAAAATGCGC
CGTGAAAAGCTGGGTTTTATATTTCAAAAATTCAACTTGGTGCCAGTGATGACGGCTTTGGAGAACGTCGCTTATCCGTT
GCATCTCAACGGTTTTTCAAAAACTGAACAAACCGAACTTGCCACACAAATGTTGGAACATGTGGGGCTGGGCGAATTTA
TCCATCACATGCCCGATAACTTGTCTGGTGGTCAGCAGCAACGGGTAGCGATTGCTCGCGCTTTGGTTCACAAACCTGCA
TTAGTGATTGCCGACGAGCCAACAGCAAGCCTCGATAGCCAAACCGCAAACAAAGTCATCGATATTATGAAAGGGCTCGG
GCACGAGTTTGGTACCACCTTCATTGTCGCCACTCACGACCCTCGTATGGCATCACGCTGCGATCGCACCATCGAGCTGG
TGGACGGCAAAATCATCCAAACGCACGCCAGTGTGGAGGAGGTCTCATGGGCAAGCTAA

Protein sequence : 
MIVFSQLSRDYTLGSQTVRALQDVSGEVFAGEMVALCGPSGSGKSTLLNVLGMLDSQYQGQVTFAGQPYPSGQMQAAKMR
REKLGFIFQKFNLVPVMTALENVAYPLHLNGFSKTEQTELATQMLEHVGLGEFIHHMPDNLSGGQQQRVAIARALVHKPA
LVIADEPTASLDSQTANKVIDIMKGLGHEFGTTFIVATHDPRMASRCDRTIELVDGKIIQTHASVEEVSWAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A0013 YP_007300042.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-34 47
VPBB_A0013 YP_007300042.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-38 45
VPBB_A0013 YP_007300042.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-34 42