|
Name : VPBB_A1251 (VPBB_A1251) Accession : YP_007301280.1 Strain : Genome accession: NC_019971 Putative virulence/resistance : Virulence Product : Accessory colonization factor AcfD precursor Function : - COG functional category : - COG ID : - EC number : - Position : 1385560 - 1389660 bp Length : 4101 bp Strand : - Note : Similar to RIMD VPA1376 hypothetical protein DNA sequence : ATGGGTACGATCCATGGTGATGAGCTTGACCTTAGTTTGGAAAAAACTTCTCATCGTTTAATTTTTAAAAACTACTTAAA TAATCAACTTGATGTTGAAATAGATACTTTTAAGAAGCTCCTTCAAGAAAGGTTAAGTAATGATTCTCAAACAGACAAAC AACCATCAACACATACACCGGAAGTTGAGCCTGCGGTAACCCCTGGTGCATCGAGCGATCTTTCACAAGCTTTCGTTTCT GCTAATGCTGAAAAAAGCTTAGAGTACAAACCAAAGGAACTTATCTTAACGACGGGATATTTGGTTGATAGTTTTGGTCG TTCTGTAAATGGAATTGCCTACTTTACTTCAAAAGGGCGAGGTCTAACTGGCTACAAGGATGGGCGATTAATTGGTGATG GCTCTTTAGAATTCTCTTGGGGTGATACTATCAATTTTGGTATTGATACATTTGAATTAGGTAGTACTAGAGGCAACAAG AATACAATAAAATTACAAGATCTTGGCAGTGGAAATGAAGGAAAAAATATTGAAAGCCTTGTAATGCGCTTTTCCGAGGA GAACGATCAATCAGTTTTTGTTACAGATAAAGTTACGGAAGTATTTTCTAAATATCCTAATGTAATTAATGAAGCAATTT CACTTTCATTGTCGAATGAAGATATCCAATTAGATTTAGGTAATGGCAATACCGAAGTAGTTAAAGGGGAGTTTGAAAAG CAGTTTGAATCTGGCTTAGCTGAAGATATTGATAAAGAGTTAGGGAGGCAGAAGTTAGCATTTGGGGAGCAGTATAGAGA ACCGAAACAAATTAAGGCTGTTGATTCTGACGCACAAAACGTTCAAAGGGATGTCGAGCGTTTATGGGGTGCAACTCAGC AGGCTCAGAGAGAAGGTTGGAAACCGGTAGAGCGATTCCATATTTTTCATGATAGTACGAACTTCTATGGAAGTACGGGA AGTGCTCGTGCTCAGGCTGCTGTAAACATCTCGAATAAGGCATTTCCTGTAGTAATGGCACGGAATGACAAAAACTATTG GATCGATTTTGATAAGCCTCAGGCTTGGGACGAAAATGGTCTTGCTTATATTACAGAAGCACCTTCAAAGGTTAAACCTA AAAAGGTAGATGCATCGAATGCGACCTTCAATTTACCCTTCATCAGTATTGGTGACTTAGGTAAAGGTAAAGTGATGGTT ATGGGGAATGCTCGGTATAACAGTGTGCTAGTCTGTCCAAATGGATTTAGTTGGAATGGAGGGGTTAACGACCAAGGGCA GTGTACTGGCAATACCGATAGTGATGACATGGCAAACTTCTTTAATAACGCTTTTCAATATCTAACTGGTAAAAAGGCCG GAACATTTAGCGTTGCAACTAACATTCCACATGTTTACTTTAAACGAGGTGGACAAGTATTGGGCAGCAAAGCCAGTTAC CTGATAGATAAACGTTTTGCTCAAGACACGCAACAATTGGATTCGTTTTCGGGTCTTGATCCTAACGATATCCCATTGGT TATTTTAAATGCGTATAGCTACTTGGGGGAGCAGGGGGGCTTAGGTGCATATGATTTACCTATGCAAGCAAATCTTGATG CGCCGAAACTCACCCAACAAGATATTTCAGATTTGATTGCCTATGTGGAAGACGGTGGTAGTGTCTTGATGATGGAGACC ATCAAAGGCCAAAAAGATTCTGGTGTAGTCTCTCGTTTACTTGATGCCGCTGGTATTGCTTTTGGGATTGGGGAAAGTGT AGCTCGGGACGGTAATGGTCCAAATGGAGGCTACCCTGATCGGGTTCGTAGCCAGCGTCAACAAGGTATTTGGGTTTTGG AACGTTATGCTGCTGAAGATAGTAGTAATGGCGAAGGGCCAAGCCTTCCATATGTGATAAAGGAAGATGGTAGTGTTGAA TGGAAGTATATTATTGAGAACCGTCCAGATGATAAACCTAAGTTAGAAGTCGCTAAATGGATAGAAATTAATGAGCAGGG AGATAGTAAAGTTCAAGTAGCATTTATCGATGAAGCGAACTTTTATCAAGACGGTACGTTTGATAACGAGGCACTAACAG TTGCTAAAAACCGCATTCTAGATGCATTTAAAGATAATTCAGGAAAACGAGCATATGAAGAATGTACAAATAATGAATAT CATTATGAGGTCAACTGTTTAGAATATCGCCCTGGTAACAAGATTCCTATTAGTGGTGGACTGTATGTCCCTAACTATAC GGAGATGAAGCTCGGTGAACATGAAGCAAAAGCGATGGTAAAAGCGGCCAATATTGGTAGCAATATTGAAGCGCTTTATC AGCATGAGCGATACTTTAGAACAAAAGGTAAGCAAGGCTTCCGCTTGAATAGCGTCGATATGAGTCGTATGTACCAAAAC TTGTCTGTATGGCTCTGGAACGACCTTAGATATTCTTATGATCAAGAAAAAAATGATGAGTTAGGATTTAAGCGCTTTAC AGAGTTTCTCAACTGTTATACGGATGACAAGGCTGGTGGTAATACGATTTGTCCAGAGAGCTTGAAACTTGAACTTCAGA AAATGGATATGATCTACGCTGAAGGTGAATATGCTGGTTATATGAATCCTAGTTACCCATTGAACTATATGGAAAAACCA TTAACACGTTTAATGCTTGGGCGTTCATTCTGGGATCTTGATGTCAAGGTTGACACTAGACAGTTCCCTGGAGTTGCATC ATCGAGTGGTAGTAATGGTGGTACAATTACTCTAGATATGAGTAATAACGTCACAGCTTGGTTTGCAGGTAGTCGACAAG CGACGGGCCAATGGGCACAAGCTCATGTTCCTTTCACTGTCAGTGTAAGTGGCGCAAAAGCCCCTGTAACTATCACGGTT GCGTTAGCAGATGATTTGACTGCTCGTGAGAAACATGAAGTTGGTCTAAAGCGACCACCAAGAATGACTAAGTCATTTAT TATTGGAGGTAATAAAGCGACAAGTGAAACAATCACGGTACCTTACGGCGGTTTGATTTATGCTCAAGGTGGTAATTCTG AGAGTGTACAATTAACCTTCACGGGAACATTGGCGGCACCACTGTTCATTGATGGCAGTTGGAAAAATGATTTAGATTCT CCAGCACCTGTTGGGGAGGTGGTGAGTAAATCATTCATCTATACTGGTCCTAAAGCTAACCTTCGTGCAGAAAACTACCC AGGAGGTATTGAGCAGTTTGCTAAGGATTTGGATCAGTTCGCATCGGATCTCAATGATTTTTATGCGAGAGATGAAGGCC TTGATGGCCAAGCTAACCGTAAAGTGACAGGGGATGAGAATCCAAACAGCCGGCATCATTTTGTCAACGATGTGGCAATT AGTATTGGTGCTGCGCACTCAGGTTATCCTGTTATGAACAGTAGTTATAATCTTAACAGTAGCAATATTAACACGACACC ACTGAATGATTGGTTGTTATGGCATGAAGTAGGGCACAACGCCGCGGAAGCACCATTTGTTGTAGAAGGCGCGACAGAGG TAGTCAATAACTTGCTAGCTCTATACATGCAAGATTTGCATATCGGCAAAATGACGCGTGTTGAGCAGGATATCCAGGTT GCCCCCGAGTTTGTCAGAACTGAACATGGTCATGCTTGGGCTGCTGGAGGTGCCGCAGAGCGCTTAGTTATGTTCGCTCA GCTAAAAGAGTGGGCTGAGAGTGAGTTTGATATTCGTGATTGGTACCAAGGAGAGCTACCAAGCTATTATTCTGAGGTTG AGGGTGTAAAAGGTTGGAATCTGTTCAAGTTGATGCATCGCTTAACACGTAATGAGAGTGATGGCATTTTTTATCTTAAA AGTACTAATGCCTGCCGTTGGCAAGGATTAAGTAAGAGTGACCAACTAATGGTTTGTGCTTCTTATGCAGCACAAACTGA TTTGTCTGATTTCTTCTTAGCATGGAACCCGGGGGCAAGAAGCTTTATTTATCCAGGAAGCTCAGAGCCAAGTTATGAGG GAGGTGTCACTCAGAAAGGTTTAGATGTAGTGAGAAAACTTGGATTGAAAAAGCCAAGTTTAGATCCAGAGGAGATTAAC ACTATTACTGTAAGGAAATGA Protein sequence : MGTIHGDELDLSLEKTSHRLIFKNYLNNQLDVEIDTFKKLLQERLSNDSQTDKQPSTHTPEVEPAVTPGASSDLSQAFVS ANAEKSLEYKPKELILTTGYLVDSFGRSVNGIAYFTSKGRGLTGYKDGRLIGDGSLEFSWGDTINFGIDTFELGSTRGNK NTIKLQDLGSGNEGKNIESLVMRFSEENDQSVFVTDKVTEVFSKYPNVINEAISLSLSNEDIQLDLGNGNTEVVKGEFEK QFESGLAEDIDKELGRQKLAFGEQYREPKQIKAVDSDAQNVQRDVERLWGATQQAQREGWKPVERFHIFHDSTNFYGSTG SARAQAAVNISNKAFPVVMARNDKNYWIDFDKPQAWDENGLAYITEAPSKVKPKKVDASNATFNLPFISIGDLGKGKVMV MGNARYNSVLVCPNGFSWNGGVNDQGQCTGNTDSDDMANFFNNAFQYLTGKKAGTFSVATNIPHVYFKRGGQVLGSKASY LIDKRFAQDTQQLDSFSGLDPNDIPLVILNAYSYLGEQGGLGAYDLPMQANLDAPKLTQQDISDLIAYVEDGGSVLMMET IKGQKDSGVVSRLLDAAGIAFGIGESVARDGNGPNGGYPDRVRSQRQQGIWVLERYAAEDSSNGEGPSLPYVIKEDGSVE WKYIIENRPDDKPKLEVAKWIEINEQGDSKVQVAFIDEANFYQDGTFDNEALTVAKNRILDAFKDNSGKRAYEECTNNEY HYEVNCLEYRPGNKIPISGGLYVPNYTEMKLGEHEAKAMVKAANIGSNIEALYQHERYFRTKGKQGFRLNSVDMSRMYQN LSVWLWNDLRYSYDQEKNDELGFKRFTEFLNCYTDDKAGGNTICPESLKLELQKMDMIYAEGEYAGYMNPSYPLNYMEKP LTRLMLGRSFWDLDVKVDTRQFPGVASSSGSNGGTITLDMSNNVTAWFAGSRQATGQWAQAHVPFTVSVSGAKAPVTITV ALADDLTAREKHEVGLKRPPRMTKSFIIGGNKATSETITVPYGGLIYAQGGNSESVQLTFTGTLAAPLFIDGSWKNDLDS PAPVGEVVSKSFIYTGPKANLRAENYPGGIEQFAKDLDQFASDLNDFYARDEGLDGQANRKVTGDENPNSRHHFVNDVAI SIGAAHSGYPVMNSSYNLNSSNINTTPLNDWLLWHEVGHNAAEAPFVVEGATEVVNNLLALYMQDLHIGKMTRVEQDIQV APEFVRTEHGHAWAAGGAAERLVMFAQLKEWAESEFDIRDWYQGELPSYYSEVEGVKGWNLFKLMHRLTRNESDGIFYLK STNACRWQGLSKSDQLMVCASYAAQTDLSDFFLAWNPGARSFIYPGSSEPSYEGGVTQKGLDVVRKLGLKKPSLDPEEIN TITVRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 63 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 63 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 63 |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_A1251 | YP_007301280.1 | Accessory colonization factor AcfD precursor | VFG0106 | Protein | 0.0 | 63 |
