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Name : VPBB_A1216 (VPBB_A1216) Accession : YP_007301245.1 Strain : Genome accession: NC_019971 Putative virulence/resistance : Virulence Product : T3SS2 ATP synthase Function : - COG functional category : - COG ID : - EC number : - Position : 1352333 - 1353595 bp Length : 1263 bp Strand : - Note : Equivalent to RIMD VPA1338 putative ATPase YscN DNA sequence : ATGCTCAAGTACTTTTTTAAAGTGAAGGAGTCGTATCAAGATACAGTGATTTGTCATGTCAACATCGATACTTTTGTTGG GCAAGAGTGCTTTGTGCATACTATCACTGGAGAGAGAATCCGCGGTGAAATCGTTAAGGTGACAGGCTCAAAGTTGGAGA TTAAGTTACTTCAACCGGGATCAGTGCAACGGGGGGGCAAAGTAGAGATCACGCCACGACGTTTTTGTTTTCCCCTAAAT GAAAGCGCGCTAGTTGGTAAAGTAATTAACTGCTATGGAGAAACCTTATACGGTGATAGTTACTTAGGGCAACCGGGCGA ATTTATCGATTTGCCAATCGCCGTTGAGCCTATTCCCTTGCAGATGCGAGCTCCTATTGAAACGGTATTTCCAACAAAGT TAAAGATCATCGATGGGTTGTTTACTATTGGAGAAGGACAACGTTTAGGATTATTCGCACCGGCAGGGGCAGGTAAAACC ACGACAGTATCCATTATGGCCAACAATATGGATGCTGATGTGGTCATCTTCGCCATGATTGGTGAACGCGCTCGTGAGGT TGTCGAATTTCTTGAAGGGGAAATCGGTCCAGAAGTAATCAGAAAATCGATCACTATAGTTTCAACATCAGAAGCTAACC CGTTAGAGAAAGTTCGATCTGGTTTGGTTGCTGTTTCAATAGCTCGTTACTATATGGAACAGGGTAAGAAAGTAGTACTT TATTTTGACTCTTTAACACGATTTGCTCGTGCTCAGGCCATGTTGGATGGGACTCCAATTAAAGGGGGGATTCCGATAGG AGTATCGTTGGCTCTTTCTCGTTTGGTGGAAAGCTGTGGTAATTCCATACAAGGTTCGGTTACCGGTATTTTTACCGTTT TGATCGAAAAGGAAATAGATGATGATCCTATTGCTCATGAGGTAAAGTCATTAATCGATGGCCATTTGGTGTATTCAACC ACTATAGCCGCAACAGGACGTTACCCTGCGATTGATGTACTCAAGAGTAAGAGTCGTCTACAAAATAAAGTACAAGAAAA GTACTATGTGCGACTTTCTGAGAAAATTAAAGACATGGTTTATCGCTATTTCAATGTGGAGTTACTCATTCGAGTCGGTG AGTACGAGAAAGGTAATGATCTAGAAACTGATGAAGCTATAGAACGCTACCCTAAAATTATCGAATTCTTAAAACAAGGC TTTGACGGTGTTGAGTATGAAGAAACCCTCCAAGAAATGGAAAGAATTTGGTCAAATTATTGA Protein sequence : MLKYFFKVKESYQDTVICHVNIDTFVGQECFVHTITGERIRGEIVKVTGSKLEIKLLQPGSVQRGGKVEITPRRFCFPLN ESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAPIETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKT TTVSIMANNMDADVVIFAMIGERAREVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVL YFDSLTRFARAQAMLDGTPIKGGIPIGVSLALSRLVESCGNSIQGSVTGIFTVLIEKEIDDDPIAHEVKSLIDGHLVYST TIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDMVYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQG FDGVEYEETLQEMERIWSNY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcN | ABA47275.1 | HrcN | Virulence | S-PAI | Protein | 1e-56 | 42 |
| hrcN | AAG33879.1 | HrcN | Virulence | Hrp PAI | Protein | 3e-54 | 41 |
| hrcN | NP_791227.1 | type III secretion cytoplasmic ATPase HrcN | Virulence | Hrp PAI | Protein | 3e-54 | 41 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 3e-52 | 41 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 3e-52 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_A1216 | YP_007301245.1 | T3SS2 ATP synthase | VFG0390 | Protein | 2e-58 | 41 |
