Gene Information

Name : VPBB_A1160 (VPBB_A1160)
Accession : YP_007301189.1
Strain :
Genome accession: NC_019971
Putative virulence/resistance : Resistance
Product : putative membrane-associated metal-dependent hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1300827 - 1302482 bp
Length : 1656 bp
Strand : +
Note : Equivalent to RIMD VPA1280 hypothetical protein

DNA sequence :
ATGAAGACTGTTGATTCTCCAAAGAAAGGTATCCCATACGTTGCCTTTACTGTTCTACTCGCGCTGTATTTCGCTCTCGT
GGTGAACATCCCAATCTATAAAGAACTCATTGGGATTTTCTCTAAGTTAGACGAAGTCAAAATCGGGTTTATTATCACTA
TTCCGATTTTCTTTTTTGCCGCGCTTAATTTCTTATTCAACCTATTTAGCTGGCCATGGGTTGGAAAGCCGTTCTTTATC
TTGCTGCTCGTAGTCTCTAGCTTAGTAAGCTACGCAGGCTATAACTACGGAACGCTGTTTGACTCTGGGATGATCGCCAA
CATCGTCGAGACCGACTCGAGTGAAGCAAGCTCTTATCTCAGCACGTATTCGGTCGTTTGGACGACGTTAATGGGTGTGA
TTCCTGCCCTGATTGTGTTCAAAGTAAAGCTGCAACCACAACGCGGACAATGGCTACGCTTTGTGCTTACAAAACTGGTC
GCGATGCTCGCTTCGTTAGCAGTTATTGCCGTGATTGCGGGGTTGTACTATCAAGATTACGCATCTGTGGGTCGCAATAA
CAGCTACCTGAAAAAAATGATCATCCCAACGCAATATGTCTACAGCGCGACAAGTTACGTAAAAGAAAATTACTTAACTA
CGCCACAGCCATATCGTGAAATCGGTACTGATGCACAGCAATCTCCGACCGCTTTACAGCAAGCGCAGGACAAACCGACG
TTACTCGTTTTTGTAGTAGGTGAAACCGCACGTACTCAAAACTATCAACTGAATGGTTACGAGCGTGAAACTAACCCCTA
CACCAGCCAATTAGATGTTATTTCTTTTAAAGATGTAGCGTCATGCGGCACTGCGACAGCAGTATCTGTACCATGCATGT
TTTCTCAGTTAACGCGCAATCAATTTGACCGTAAACAAGCTGATAACCAAGACAACGCGTTAGATATCATGCAACGTGCA
GGTATCGACCTACTGTGGAAAGAAAACGACGGTGGCGATAAAGAAGTCGCGCATAAGATCAAAAAAATCGAAGTAGACAG
AAAGCAACAAAACGCACTGTGCAACGGTCAAACTTGTTACGACATGGCACTACTGAGTGACTTTGACCAAGAAGTGTCGA
ACATGAACGGTAACCGAGTTGTAGCCATGCACCTTATTGGCAGCCATGGCCCAACTTACTTCCAACGTTACCCGAAAGAG
AAAGCGTTTTTCCAACCAGATTGCCCACGTGCAGACATTGAAAACTGTAGCGTCGAAGAGATCGTAAATACCTACGACAA
TACCATTCGTTACACAGACTTTGTCTTGGAACAAACCATCAACAAACTTAAAACGTTAGAAGACAAATACAACACTGCGT
TGATTTATGTTTCTGACCACGGTGAATCGCTTGGTGAAAGCGGCATGTTCTTACATGGTATGCCTTACGGACTTGCTCCG
GATTTCCAGAAACGAGTACCGCTTATCATGTGGATGTCGCCAAGCTTTAAGCAAGCAAAACACATCAACACGGATTGCTT
GTCCAAAGAAGCACAAAATGCAGGTAAGTACTCGCATGACAATGTGTTCCACTCTCTGCTTGGTATTATGGATGTAAAAA
CCCAAGCCTACGACGGTCAGTTAGATATCTTCAAAACCTGTCGAACCGTATCCTAA

Protein sequence :
MKTVDSPKKGIPYVAFTVLLALYFALVVNIPIYKELIGIFSKLDEVKIGFIITIPIFFFAALNFLFNLFSWPWVGKPFFI
LLLVVSSLVSYAGYNYGTLFDSGMIANIVETDSSEASSYLSTYSVVWTTLMGVIPALIVFKVKLQPQRGQWLRFVLTKLV
AMLASLAVIAVIAGLYYQDYASVGRNNSYLKKMIIPTQYVYSATSYVKENYLTTPQPYREIGTDAQQSPTALQQAQDKPT
LLVFVVGETARTQNYQLNGYERETNPYTSQLDVISFKDVASCGTATAVSVPCMFSQLTRNQFDRKQADNQDNALDIMQRA
GIDLLWKENDGGDKEVAHKIKKIEVDRKQQNALCNGQTCYDMALLSDFDQEVSNMNGNRVVAMHLIGSHGPTYFQRYPKE
KAFFQPDCPRADIENCSVEEIVNTYDNTIRYTDFVLEQTINKLKTLEDKYNTALIYVSDHGESLGESGMFLHGMPYGLAP
DFQKRVPLIMWMSPSFKQAKHINTDCLSKEAQNAGKYSHDNVFHSLLGIMDVKTQAYDGQLDIFKTCRTVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 5e-107 47
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 5e-107 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_A1160 YP_007301189.1 putative membrane-associated metal-dependent hydrolase BAC0485 Protein 2e-91 42