Gene Information

Name : Thethe_00959 (Thethe_00959)
Accession : YP_007298319.1
Strain : Thermoanaerobacterium thermosaccharolyticum M0795
Genome accession: NC_019970
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 959523 - 960227 bp
Length : 705 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGGGAAGCTTTGTAGAAGTAAAGAATATTTCTAAAAGATATAAGATGGGTGAAATCACTATTACTGCAGTTTCAAGGGT
AAGCTTCAATATAGAAAAAGGTGAGTTTACCGTAATAGTAGGTGAAAGCGGTGCTGGCAAGACGACAATTTTAAATATGC
TTGGTGGAATGGATACCTGTGATGAAGGCCAAATAATTGTGGATGGAAATGAGATCAGCAAATACAACCAGAGACAGTTG
ACAGCGTACCGCAGAAAAGATATAGGGTTTGTATTTCAGTTTTATAATCTTGTTCCAAACCTTACGGCTTTGGAAAATGT
AGAACTAGCAACGGATATCTGTGATAATCCTATGGACCCTGTAGAGGTACTTAAAGATGTAGGGCTTTCTGAAAGGCTTA
ACAATTTTCCTTCGCAATTGTCAGGTGGCGAACAGCAAAGGGTTGCTATAGCCAGAGCACTGGCAAAGAACCCTAAATTG
TTATTATGTGATGAACCAACAGGGGCTCTAGATTATAAGACTGGAAGGGCAATTTTGAAGTTGCTGCACGAAACGTGCAG
GAGATTAGGAATGACAGTCATAATAATAACGCACAACAAGGCTATAACTCCAATGGCAGATAAGGTTATAAGCCTTAAAA
ATGGTAGCGTTGAAAATATAGTTGTCAACGATTCTCCAGTCCCTATAGAAAGGATAGAATGGTAA

Protein sequence : 
MGSFVEVKNISKRYKMGEITITAVSRVSFNIEKGEFTVIVGESGAGKTTILNMLGGMDTCDEGQIIVDGNEISKYNQRQL
TAYRRKDIGFVFQFYNLVPNLTALENVELATDICDNPMDPVEVLKDVGLSERLNNFPSQLSGGEQQRVAIARALAKNPKL
LLCDEPTGALDYKTGRAILKLLHETCRRLGMTVIIITHNKAITPMADKVISLKNGSVENIVVNDSPVPIERIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thethe_00959 YP_007298319.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 3e-69 60
Thethe_00959 YP_007298319.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-42 43
Thethe_00959 YP_007298319.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-43 43