Gene Information

Name : Thethe_02717 (Thethe_02717)
Accession : YP_007299976.1
Strain : Thermoanaerobacterium thermosaccharolyticum M0795
Genome accession: NC_019970
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2727796 - 2728494 bp
Length : 699 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
TTGAGTAGCAGGATACTAATAATTGACGACGAAAAACCTATTGTAGAGATTTTGAAATACAATTTAGAAAAAAATGGTTA
CAGTACAATTGAAGCGTATGACGGAGAGGAAGGTCTAAGACTAGCGCAAGAGAAAAATCCTGACCTTATCCTCCTTGATG
TCATGCTTCCAAAGATGGATGGTTTTACTGTTTTGAGAATATTAAGGCAGACAATGACGACGCCTATTTTAATGCTGACG
GCTAAAGAAGAAGAAGTAGACAAAGTGTTGGGATTAGAATTAGGCGCCGATGACTATGTGACAAAGCCATTTTCCATGAG
GGAGCTTATTGCACGGGTGAAAGCTAACCTGAGGCGAAGTGGAATAAACAATGGAGAGGGCATGTCTAATATCATAATCG
TTAATAATTTAAGCATAGATTTATCAAAGTATAAAGTTGAAAAAAATGGAAGACCTATAGAGCTGACATCAAGGGAATTT
GACCTTTTAAAATTCCTAGTGGCCAACCGAGGGCTCATTTTTTCAAGAGAAATGCTTTTGGAAAAGGTGTGGGGCTATGA
ATATTTTGGCGATGTGAGGACAGTTGATGTGACTATAAGGCGATTGAGGGAAAAAATCGAAGATGATCCAGCAAACCCAA
GGTATATACATACCAAAAGAGGGGTTGGTTATTATTTTAGCGAAGAAAGTGAACTATAA

Protein sequence :
MSSRILIIDDEKPIVEILKYNLEKNGYSTIEAYDGEEGLRLAQEKNPDLILLDVMLPKMDGFTVLRILRQTMTTPILMLT
AKEEEVDKVLGLELGADDYVTKPFSMRELIARVKANLRRSGINNGEGMSNIIIVNNLSIDLSKYKVEKNGRPIELTSREF
DLLKFLVANRGLIFSREMLLEKVWGYEYFGDVRTVDVTIRRLREKIEDDPANPRYIHTKRGVGYYFSEESEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-38 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-37 42
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 1e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 6e-60 54
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 5e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 7e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 7e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 7e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 7e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 7e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 5e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 7e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 7e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 7e-53 51
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 6e-52 50
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 5e-47 47
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 2e-47 46
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 3e-42 46
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 5e-36 44
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 5e-36 44
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 5e-36 44
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 5e-36 44
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 5e-36 44
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 5e-36 44
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 5e-36 44
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 5e-36 44
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 4e-38 44
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000675.2.gene1535. Protein 8e-40 43
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 3e-39 43
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 2e-41 43
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 2e-41 43
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene1528. Protein 5e-35 43
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 1e-39 43
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 2e-38 43
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 1e-29 42
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 6e-39 42
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.915041.p Protein 6e-30 42
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3834. Protein 6e-30 42
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene5135. Protein 3e-25 42
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001485.1.gene721.p Protein 4e-34 41
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF162694.1.orf4.gene Protein 6e-37 41
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain EU250284.1.orf4.gene Protein 2e-38 41
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain DQ212986.1.gene4.p01 Protein 3e-40 41
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 7e-35 41
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 7e-36 41
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0533 Protein 7e-30 41
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene4257. Protein 7e-30 41
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene4273. Protein 4e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1389 Protein 5e-35 45
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 3e-38 43
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 6e-41 43
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 7e-37 42
Thethe_02717 YP_007299976.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 7e-39 41