Gene Information

Name : Thethe_02538 (Thethe_02538)
Accession : YP_007299800.1
Strain : Thermoanaerobacterium thermosaccharolyticum M0795
Genome accession: NC_019970
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2508454 - 2509773 bp
Length : 1320 bp
Strand : -
Note : PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase

DNA sequence :
ATGAGCAAATATTTTGAAAAAGTATCAAAAATTAAATATGAAGGACCTAAATCAAATAATCCTTATGCATTTAAATTCTA
CAATCCAGAGGAAGTAATCGATGGAAAGACGATGGAGGAACATCTTCGCTTTTCTATAGCTTACTGGCACACGTTTACAG
CAGATGGGACAGACCAATTCGGAAAAGCAACAATGCAAAGGCCGTGGAATCACCTTACAGATCCTATGGACATAGCAAAA
GCTAGAGTTGAAGCGGCATTTGAATTTTTTGACAAAATTAATGCACCTTTCTTCTGTTTCCATGATAGAGATATAGCACC
AGAAGGTGATACATTAAGAGAGACCAATAAAAACCTGGATATCATCGTTGCTATGATAAAGGATTACCTGAAGACCAGCA
AGACAAAAGTGTTGTGGGGAACTGCAAACCTATTCTCAAATCCGAGATTTGTACATGGTGCATCAACATCCTGCAATGCA
GATGTTTTTGCATACTCTGCAGCACAGGTTAAGAAAGCACTTGAAATTACAAAAGAGCTTGGAGGACAAAACTACGTATT
CTGGGGCGGAAGAGAAGGATACGAGACGCTTCTTAATACAGATATGGAGTTAGAGCTTGATAATTTTGCAAGATTTCTAC
ACATGGCAGTTGATTATGCAAAAGAAATCGGCTTTGAAGGACAATTCTTAATTGAGCCGAAGCCGAAAGAACCTACAAAA
CATCAATACGACTTTGATGTAGCAAATGTATTAGCATTCTTGAGAAAATACGATCTTGATAAATATTTCAAAGTGAATAT
AGAAGCTAATCATGCAACATTAGCAGCACATGACTTCCAGCATGAGCTCAGATATGCAAGGATAAATGGAGCATTAGGAT
CAATAGATGCAAATACAGGTGACATGCTTTTAGGATGGGATACAGATCAGTTCCCGACAGATATACGCATGACAACACTT
GCAATGTATGAAGTCATAAAGATGGGTGGATTTGACAAAGGTGGATTGAATTTCGATGCAAAAGTAAGAAGAGCTTCATT
TGAACCAGAAGATCTTTTCTTAGGACATATAGCAGGTATGGATGCTTTTGCAAAAGGATTCAAAGTAGCTTATAAGCTTG
TAAAAGATGGCGTATTTGACAAGTTCATCGAAGAGAGATATGCAAGCTACAAAGAAGGCATTGGCGCAGATATTGTAAGC
GGTAAAGCTGACTTCAAGAGTTTGGAGAAATACGCATTAGAGCACAGCGAGATTGTTAATAAATCAGGTAGGCAAGAAAT
GCTTGAATCAATACTCAATCAGTATTTGTTTGCAGAATAA

Protein sequence :
MSKYFEKVSKIKYEGPKSNNPYAFKFYNPEEVIDGKTMEEHLRFSIAYWHTFTADGTDQFGKATMQRPWNHLTDPMDIAK
ARVEAAFEFFDKINAPFFCFHDRDIAPEGDTLRETNKNLDIIVAMIKDYLKTSKTKVLWGTANLFSNPRFVHGASTSCNA
DVFAYSAAQVKKALEITKELGGQNYVFWGGREGYETLLNTDMELELDNFARFLHMAVDYAKEIGFEGQFLIEPKPKEPTK
HQYDFDVANVLAFLRKYDLDKYFKVNIEANHATLAAHDFQHELRYARINGALGSIDANTGDMLLGWDTDQFPTDIRMTTL
AMYEVIKMGGFDKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDGVFDKFIEERYASYKEGIGADIVS
GKADFKSLEKYALEHSEIVNKSGRQEMLESILNQYLFAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 1e-125 60
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 1e-125 60