Gene Information

Name : Thethe_02289 (Thethe_02289)
Accession : YP_007299556.1
Strain : Thermoanaerobacterium thermosaccharolyticum M0795
Genome accession: NC_019970
Putative virulence/resistance : Resistance
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2251926 - 2252603 bp
Length : 678 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGAAAACATTTTAATTATTGATGATGAAGAGATGCTTGTCAAAGGTTTGAGGTTGTCTCTTATTCAAGAAGGCTATTC
CGTTGATTATGCGTATGACGGAGAAGAAGGATTGGAAAAAATCAAAAGTGGCAATTTTGACCTTGTGATACTTGATTTAA
TGCTGCCTAAAATAGATGGTCTTACTCTCTGCAAGGAAGTAAGGTCATTTTCAAATATACCTATAATAATGCTTACTGCC
AAAGGCGAAGATGTAGATAAAATTGTAGGAATAGAGATGGGAGCTGATGATTATCTGGCAAAACCGTTCAATACTAGAGA
ACTTATAGCCAGAATCAGGGCTTTGTTCAGAAGAACAACATCACCTTTTGTTAAAAAACAAGATATTATAAAGATAGGCG
ATATAACCATCAACATTCCAGACAAGATTGTGCAGAAAAATGGTAAGGAAATCGATCTTACAAATAAAGAATTTGATTTG
CTGGTTTTACTAGCTTCAAATCCTGGAAAATTGTATTCAAAAGACAAATTGATGGATCTGATATGGGGATTTGACTTTTA
TGGTGATACAAATACGGTAAATGTCCATATAAGAAAACTTAGAGAAAAAATAGAGGATGATCCTGCAAATCCTAAACATA
TTTTTACCAAGTGGGGTTCAGGCTATTACATGAAATAA

Protein sequence :
MENILIIDDEEMLVKGLRLSLIQEGYSVDYAYDGEEGLEKIKSGNFDLVILDLMLPKIDGLTLCKEVRSFSNIPIIMLTA
KGEDVDKIVGIEMGADDYLAKPFNTRELIARIRALFRRTTSPFVKKQDIIKIGDITINIPDKIVQKNGKEIDLTNKEFDL
LVLLASNPGKLYSKDKLMDLIWGFDFYGDTNTVNVHIRKLREKIEDDPANPKHIFTKWGSGYYMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sboR YP_006309915.1 SboR Not tested FWisland_1 Protein 5e-30 44
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-39 42
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 1e-38 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 8e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 3e-49 45
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010079.5776364.p0 Protein 2e-37 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859858.p0 Protein 2e-37 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794948.p0 Protein 2e-37 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003417.p0 Protein 2e-37 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614146.p0 Protein 2e-37 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3238224.p0 Protein 2e-37 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914065.p0 Protein 2e-37 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121390.p0 Protein 2e-37 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AM180355.1.gene1830. Protein 1e-33 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF155139.2.orf0.gene Protein 1e-35 44
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 8e-32 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 9e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 6e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 6e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 6e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 6e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 6e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 8e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 6e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 2e-35 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 6e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 6e-43 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-37 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 4e-35 43
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_014475.1.orf0.gen Protein 7e-35 42
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_005054.2598277.p0 Protein 7e-35 42
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AF130997.1.orf0.gene Protein 7e-32 42
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain DQ212986.1.gene4.p01 Protein 2e-31 42
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000675.2.gene1535. Protein 1e-34 42
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1676. Protein 1e-33 42
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 2e-30 41
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 2e-34 41
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 8e-37 41
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 5e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1563 Protein 2e-39 42
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1702 Protein 4e-39 42
Thethe_02289 YP_007299556.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 3e-34 41