Gene Information

Name : Thethe_01417 (Thethe_01417)
Accession : YP_007298756.1
Strain : Thermoanaerobacterium thermosaccharolyticum M0795
Genome accession: NC_019970
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1389589 - 1390905 bp
Length : 1317 bp
Strand : -
Note : PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI

DNA sequence :
ATGATCAGTAATAATTTTTTTGAAAGATATAAGACTGTTTTACGTGACAGAAGCTTTATAAAGTATTATGGAAAAGTAAG
TCAAGTTGTTGGTTTAACAATTGAAAGCATTGGTCCAATATCTAATGTTGGAGATGTATGCGAGATAAAGTCTATAAACG
GTAATACAATTTATGCTGAAGTAATGGGATTTAAAGATGATAAAGTTTATTTGATGCCTTTAGGAAATATGGATGGCATA
GGGCCCGGTAATAGCGTTATTTCTACAGGACAGAAATTAAAAATAGGGGTTGGAGAGGAATTACTCGGGAGAGTTATAGA
TGCATTAGGTAATCCCATTGATGGAAAAGGTCCTATAAAATTCAAAAAGCTGATAAGCACTAATAATGTTCCGCCGAATC
CTCTTGAGAGAAAGAGAATAAGGGAAGTAATGCCTCTTGGTATAAAAGCAATAGATGGTTTACTTACATGTGGTAAAGGA
CAGAGAGTAGGCATATTTGCAGGTAGTGGTGTCGGAAAAAGTACTTTACTTGGAATGATAGCCAGGAATGCCAAATCTGA
TATCAATGTAATTGCACTAATTGGTGAAAGAGGAAGAGAAGTAAATGAGTTTATTGAGAAAGATTTAGGTGAAGATGGCT
TAAAAAGATCGATCTTAGTCATATCGACTTCTGATACACCTGCTTTGATGAGAGTTAAAGGTGCAATGACAGCTACATCT
ATTGCAGAATATTTTAGAGATCAAGGGCTTGATGTTTTATTTATGATGGATTCTGTTACAAGATTTGCTATGGCACAGAG
AGAAATAGGATTGTCTATTGGTGAAGCTCCCGTTTCAAGAGGCTATACACCTTCAGTTTTTTCGATTCTTCCTAAGTTAT
TAGAAAGAGCAGGTTCTTCAAAAAATGGTTCTATAACTGCTCTTTATACAGTATTGGTAGATGGTGATGATTTAAATGAA
CCAATTACAGATGCTGTCAGGGGCATATTGGATGGACATATTGTTTTGTCAAGAAAACTGGCAAATAAAGGACAATATCC
TGCAATAGATATTTTAGCAAGTATTAGCAGGGTAATGAACGATATTGTATCAGACGAACATAAAGACTTGTCTTCAAAAT
TTAAAAGTATATTATCAGTTTATGAGGAATCGGAAGATTTGATTAATATTGGTGCTTATGCAAGAGGAAGTAATCCTAAA
ATAGATGAAGCAATTTCATTACACGACGATATGATAAATTATATAAAACAGACTACAGACGAAAATTATAACTTTGAAGA
TGAACTTAATATGCTAAAAAATATTTTAAACAGGTGA

Protein sequence :
MISNNFFERYKTVLRDRSFIKYYGKVSQVVGLTIESIGPISNVGDVCEIKSINGNTIYAEVMGFKDDKVYLMPLGNMDGI
GPGNSVISTGQKLKIGVGEELLGRVIDALGNPIDGKGPIKFKKLISTNNVPPNPLERKRIREVMPLGIKAIDGLLTCGKG
QRVGIFAGSGVGKSTLLGMIARNAKSDINVIALIGERGREVNEFIEKDLGEDGLKRSILVISTSDTPALMRVKGAMTATS
IAEYFRDQGLDVLFMMDSVTRFAMAQREIGLSIGEAPVSRGYTPSVFSILPKLLERAGSSKNGSITALYTVLVDGDDLNE
PITDAVRGILDGHIVLSRKLANKGQYPAIDILASISRVMNDIVSDEHKDLSSKFKSILSVYEESEDLINIGAYARGSNPK
IDEAISLHDDMINYIKQTTDENYNFEDELNMLKNILNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-106 51
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-104 51
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 5e-104 51
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 5e-104 51
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 9e-103 51
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-102 51
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 8e-103 50
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 7e-103 50
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-90 49
unnamed AAL06369.1 EscN Virulence LEE Protein 8e-92 49
escN YP_003236088.1 translocator EscN Virulence LEE Protein 6e-91 49
escN AAC31513.1 L0034 Virulence LEE Protein 2e-90 49
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-90 49
escN YP_003223475.1 translocator EscN Virulence LEE Protein 3e-91 49
escN AAC38383.1 EscN Virulence LEE Protein 1e-90 49
escN AAK26715.1 EscN Virulence LEE Protein 4e-91 49
escN AAL57542.1 EscN Virulence LEE Protein 4e-91 49
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-91 49
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-90 49
escN CAI43874.1 EscN protein Virulence LEE Protein 2e-91 49
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-101 48
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-101 48
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-91 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-90 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-90 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-90 47
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-88 47
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-88 47
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 4e-89 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 4e-89 46
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-78 45
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 7e-79 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 4e-89 45
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 6e-82 44
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 8e-82 44
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-93 44
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 4e-80 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-88 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-82 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 7e-83 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-83 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 8e-77 43
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 8e-77 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 3e-77 42
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 2e-72 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG2144 Protein 5e-108 53
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG0390 Protein 8e-106 52
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG0192 Protein 8e-108 51
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG0048 Protein 1e-106 50
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-102 50
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG0730 Protein 8e-91 49
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG0812 Protein 9e-91 49
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG2499 Protein 6e-96 48
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG0515 Protein 3e-90 47
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG2331 Protein 6e-92 45
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG1008 Protein 1e-71 42
Thethe_01417 YP_007298756.1 flagellar protein export ATPase FliI VFG1778 Protein 8e-74 42