Gene Information

Name : Thethe_01404 (Thethe_01404)
Accession : YP_007298743.1
Strain : Thermoanaerobacterium thermosaccharolyticum M0795
Genome accession: NC_019970
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1380897 - 1381166 bp
Length : 270 bp
Strand : -
Note : PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ

DNA sequence :
ATGGATCCTGGAGTAGTTCTTGATATTGGAAGGGAAGCATTAATGGTAACAATGATTGTATCAGCGCCGCTTTTAATTGT
ATCTCTATTGATAGGACTCATTATAAGTATATTTCAAGCGACAACACAGATTCAGGAGCAGACTTTGACATTTGTACCGA
AGATTTTAGCTATTTTTGCTTCTATAATATTGTTTGGGCCATGGATGCTAACAACATTAATTAATTATACACAAAAATTA
ATATTGAACATTAATAATTTTATTAAGTAG

Protein sequence :
MDPGVVLDIGREALMVTMIVSAPLLIVSLLIGLIISIFQATTQIQEQTLTFVPKILAIFASIILFGPWMLTTLINYTQKL
ILNINNFIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 7e-05 43
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 7e-05 43
unnamed AAL06355.1 EscS Virulence LEE Protein 2e-04 43
escS NP_290282.1 hypothetical protein Virulence LEE Protein 7e-04 43
ECs4582 NP_312609.1 EscS Virulence LEE Protein 7e-04 43
escS AAC38370.1 EscS Virulence LEE Protein 5e-04 43
escS AAC31527.1 L0048 Virulence LEE Protein 5e-04 43
escS ACU09472.1 hypothetical protein Not tested LEE Protein 5e-04 43
escS YP_003236102.1 T3SS structure protein EscS Virulence LEE Protein 7e-04 43
escS CAI43888.1 EscS protein Virulence LEE Protein 2e-04 42
escS AAK26701.1 EscS Virulence LEE Protein 2e-04 42
escS AAL57528.1 EscS Virulence LEE Protein 2e-04 42
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 3e-04 42
escS CAC81848.1 EscS protein Virulence LEE II Protein 2e-04 42
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 3e-04 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Thethe_01404 YP_007298743.1 flagellar biosynthetic protein FliQ VFG1260 Protein 2e-11 49
Thethe_01404 YP_007298743.1 flagellar biosynthetic protein FliQ VFG2339 Protein 5e-10 45
Thethe_01404 YP_007298743.1 flagellar biosynthetic protein FliQ VFG2495 Protein 9e-10 43
Thethe_01404 YP_007298743.1 flagellar biosynthetic protein FliQ VFG0716 Protein 2e-04 43
Thethe_01404 YP_007298743.1 flagellar biosynthetic protein FliQ VFG0826 Protein 2e-04 43