Gene Information

Name : Prede_1775 (Prede_1775)
Accession : YP_007296577.1
Strain :
Genome accession: NC_019968
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 359149 - 360468 bp
Length : 1320 bp
Strand : +
Note : PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase

DNA sequence :
ATGACAAAAGAGTATTTCCCCGAAATTGGCAAGATTCCATTTGAGGGTACCGAGAGCAAGACCCCCATGGCTTTCCACTA
CTACGAGCCCGAACGCGTAGTCAAAGGCAAAAAAATGAAAGACTGGCTCAAGTTTGCCATGGCTTGGTGGCATACGCTGG
GACAGGCCAGTGGCGATCAGTTTGGCGGGCAGACCCGCAACTATGCCTGGGATGCCGATGCTAACCCTGTGCAGCGTGCC
AAGGATAAGGTGGATGCCGGCTTTGAAATCATGACCAAACTGGGCATCGAATATTTCTGTTTCCATGACGTCGACCTCGT
AGACCCCGACGACGACATCGACCGCTATGAAGCCAACATGGCTGCCGTCACCGACTATCTGAAAGAAAAGATGGCTGCCG
ACCCCACAAAAAAACTGCTTTGGGGCACGGCCAACGTCTTCAGTGACAAGCGTTATATGAATGGGGCAGCCACCAATCCC
AACTTTGATGTCGTGGCCCGCGCCGCCGTACAAATCAAGAATGCAATTGATGCTACCATCAAACTCGGCGGTCAGAACTA
TGTGTTCTGGGGTGGCCGCGAAGGATACATGAGTCTGCTCAACACCCAGATGCAGCGTGAGAAGAATCATCTGGCCCGCA
TGCTCACCGCTGCTCGCGACTATGCACGCACCCAGGGCTTCAAGGGCACGTTCCTCATCGAGCCTAAGCCATGCGAGCCC
ACCAAGCACCAATACGACGTGGACACGGAGACCGTCATCGGATTCCTGCGCGCCAACGGCCTCGACAAAGACTTCAAAGT
GAACATCGAGGTGAATCATGCCACATTGGCGGGTCACACTTTCGAGCACGAACTGGCTGTGGCTGTGGACAACGGCATGC
TGGGCAGCATTGATGCCAACCGCGGTGATGCGCAGAATGGCTGGGATACCGACCAGTTCCCCATCGACAACTTCGAGCTC
ACACAAGCCATGATGCAGATTATCCGCAACGGCGGACTGGGCAACGGCGGCAGTAACTTCGATGCCAAGATTCGCCGCAA
CTCCACCGATCCAGAAGACATCTTCCTGGCCCACATCAGTGGCATGGATGCCATGGCCCGTGCTCTGCTCAATGCAGCAG
CCATCCTTGACGAGAGCGAGCTGCCCCAGATGCTGTGCGACCGCTATGCCAGTTTTGACGAGGGACAGGGCAAGGCCTTT
GAAGAGGGCCGGTTGAGTCTCGAAGACCTTGTAGATTATGCCAAGCAGAACGGTGAGCCCCGTCAAATCAGTGGCAAACA
AGAACTCTACGAGACCATCGTCGCCCTGTATAGTAAGTAG

Protein sequence :
MTKEYFPEIGKIPFEGTESKTPMAFHYYEPERVVKGKKMKDWLKFAMAWWHTLGQASGDQFGGQTRNYAWDADANPVQRA
KDKVDAGFEIMTKLGIEYFCFHDVDLVDPDDDIDRYEANMAAVTDYLKEKMAADPTKKLLWGTANVFSDKRYMNGAATNP
NFDVVARAAVQIKNAIDATIKLGGQNYVFWGGREGYMSLLNTQMQREKNHLARMLTAARDYARTQGFKGTFLIEPKPCEP
TKHQYDVDTETVIGFLRANGLDKDFKVNIEVNHATLAGHTFEHELAVAVDNGMLGSIDANRGDAQNGWDTDQFPIDNFEL
TQAMMQIIRNGGLGNGGSNFDAKIRRNSTDPEDIFLAHISGMDAMARALLNAAAILDESELPQMLCDRYASFDEGQGKAF
EEGRLSLEDLVDYAKQNGEPRQISGKQELYETIVALYSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 2e-92 50
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 2e-92 50