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Name : Mycsm_06407 (Mycsm_06407) Accession : YP_007295963.1 Strain : Mycobacterium smegmatis JS623 Genome accession: NC_019966 Putative virulence/resistance : Unknown Product : transcriptional accessory protein Function : - COG functional category : - COG ID : - EC number : - Position : 6357840 - 6360167 bp Length : 2328 bp Strand : + Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region DNA sequence : GTGCCTGCCAGCTCACCCGCAAAGTCTGTAAATGCCCGTCTCGCTGCGGAATTGACCGTCGAGGAAGCGCAGGTCGCCGC CGCTGTGCGACTGCTCGACGAGGGCGCGACCGTGCCATTCATCGCCCGGTACCGAAAAGAGGTGACCGGCAGTCTCGATG ACGGCCAGCTGCGCATCCTCGAGGAGCGTCTGCAGTATCTGCGTGAGCTCGATGACCGTCGGGCCGCGGTGCTGGCCTCC ATCGACGAGCAGGGCAAGCTCACCGACGAGTTGAGGGCCGCCCTGATGGTGGCCGACACCAAGTCGCGGGTCGAGGACAT CTACCTGCCCTACAAACCGAAGCGACGGACCAAGGCGCAGATTGCCCGCGAGGCGGGGCTCGCGCCGTTGGCCGACCGGC TACTGGCCGACCCCACACTGGTGCCGGAGAAGGTGGCTGCGGAGTTTCTGTGCGACAACGTTGCCGACGCTGCTGCAGCA CTGGACGGCGCGCGACACATTCTCGCCGAGCGGGCGGCCGAAGACGCCGAGCTCGTCGGTGCCATCCGGGAAAGGTTCTG GGCAGGCGGCTCGCTGCGCACGGAGCCGTGGTCGGCCGATGCGGCGAAAAGCCCTGCAGCACAGAAGTTTCGCGACTACT TCGAATTCAGTCAATCACTGGAGAGCATGCCGTCCCACCGTGTGCTTGCGGTCATGCGAGGCGAGAAGGAAGAGGCGCTC GCGCTCACCTTCGACGGTGGTGATGAAGCGATCTATCACGCCATGATCGCCAAAACGCTGGGTATCGACATGTCATCGAA GGCCGCGTCGACGCCATGGCTGGCCGCCACCGTCGAGTGGGCATGGCGCACGAAGCTGATGATCTCGGGCCGCGTCGACG CCCGCCTGCGGCTGCGGCGCCGCGCCGAGGAAGAGGCCGTGGCGGTGTTCGCCAAGAACCTCAAGGACCTCCTGCTCGCG GCGCCAGCAGGCAACCGCACGACGCTCGGCCTGGATCCCGGCTTCAGGACCGGAGTCAAGGTCGCGGTCGTCGACGGCAC CGGCAAGGTCGTCGACACGTGCGCGATCTACCCGCATCAGCCCCAGAAACAATGGGACACGGCCAAGGCAACTTTGGCGG CGCTGGTCGCGCGTCACGGCGTCGAGCTCATCGCCGTCGGCAACGGCACCGCGTCGCGCGAAACCGACGCCCTGGCAACC GAACTCATCGCCGATATCCGGGCCGCGGGCGGCAAGGCACCCGCGAAGGCGATGGTGAGCGAGGCCGGTGCGTCGGTGTA TTCGGCGTCAGCGTATGCGGCGCACGAGCTGCCGACGCTCGACGTGACGCTGCGTGGGGCGGTGTCGATTGCGCGGCGGC TGCAGGATCCGCTGGCCGAATTGGTGAAGATCGACCCGAAGTCGATCGGCGTTGGGCAGTACCAACACGACATCACGCCT GGGACGCTGGCGCGCAGCCTGGACGCCGTCGTCGAGGATGCGGTGAACGCGGTGGGTGTCGACCTGAATACGGCGTCCGT TCCCTTGCTGGCGCGGGTGTCCGGGGTATCCGAATCCCTAGCCGAGGCGATCGTCTCGCACCGTGACACGACGGGACCGT TCGCCAACCGCAAGGCTCTGCTGAAAGTTCCTCGCCTGGGCCCCAAGGCTTTTGAGCAGTGCGCTGGTTTCCTGCGGATC CGCGGCGGAGACGACCCGATCGATGCGTCGGGCGTGCATCCGGAGGCGTATCCGGTGGTCCGTCGAATCCTGGACCGCTC GGGGGTGACGCTCGCCGAGCTGATCGGCAACGAGCGATCGTTGCGGTCCCTTGAGCCGGCCGACTTCGCCGACGACCGAT TCGGCGTCCCCACGGTGACCGACATCCTCGCCGAACTGGAGAAGCCCGGACGCGATCCGCGACCCGCGTTCTCCACGGCC ACGTTCGCCGCCGGTGTGGAGAAGGTCGCCGACCTGACGGTGGGCATGGTGCTGGAAGGCGTCGTCACCAACGTCGCGGC GTTCGGCGCGTTCGTCGACGTCGGTGTGCATCAGGACGGCCTGGTACACGTTTCGGCGATGGCAGACCGCTTCGTGTCCG ACCCGCACGAGGTGGTCCGCTCCGGTCAGGTGGTGCGCGTCAAGGTGGTGGACGTTGATGTCGAGCGTCAGCGGATCGGG CTGAGCCTGCGGCTCAACGACACGCCGCAACAGAATCGCGGCAAACAGACCGATCAGGGACACGCGAAGCGGCCAAACCC GAATCGTGGCAAGCAGCCTCGTCAGAAGGCGTCGGACGCAGGGGGATCGATGGCGGATGCCCTGCGTAAGGCGGGCTTCG GCAATTAG Protein sequence : MPASSPAKSVNARLAAELTVEEAQVAAAVRLLDEGATVPFIARYRKEVTGSLDDGQLRILEERLQYLRELDDRRAAVLAS IDEQGKLTDELRAALMVADTKSRVEDIYLPYKPKRRTKAQIAREAGLAPLADRLLADPTLVPEKVAAEFLCDNVADAAAA LDGARHILAERAAEDAELVGAIRERFWAGGSLRTEPWSADAAKSPAAQKFRDYFEFSQSLESMPSHRVLAVMRGEKEEAL ALTFDGGDEAIYHAMIAKTLGIDMSSKAASTPWLAATVEWAWRTKLMISGRVDARLRLRRRAEEEAVAVFAKNLKDLLLA APAGNRTTLGLDPGFRTGVKVAVVDGTGKVVDTCAIYPHQPQKQWDTAKATLAALVARHGVELIAVGNGTASRETDALAT ELIADIRAAGGKAPAKAMVSEAGASVYSASAYAAHELPTLDVTLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDITP GTLARSLDAVVEDAVNAVGVDLNTASVPLLARVSGVSESLAEAIVSHRDTTGPFANRKALLKVPRLGPKAFEQCAGFLRI RGGDDPIDASGVHPEAYPVVRRILDRSGVTLAELIGNERSLRSLEPADFADDRFGVPTVTDILAELEKPGRDPRPAFSTA TFAAGVEKVADLTVGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMADRFVSDPHEVVRSGQVVRVKVVDVDVERQRIG LSLRLNDTPQQNRGKQTDQGHAKRPNPNRGKQPRQKASDAGGSMADALRKAGFGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 1e-171 | 57 |
