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Name : Mycsm_05911 (Mycsm_05911) Accession : YP_007295483.1 Strain : Mycobacterium smegmatis JS623 Genome accession: NC_019966 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity, ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 5874759 - 5877308 bp Length : 2550 bp Strand : - Note : PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA) DNA sequence : ATGTTTGAGAGATTTACCGACCGTGCCCGCAGGGTCGTCGTCCTGGCGCAAGAAGAAGCCCGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTGTTGGGACTTATTCACGAGGGTGAGGGCGTAGCGGCCAAGTCGCTAGAGTCGCTGGGCA TCTCGCTCGAAGGCGTTCGCAGCCAGGTCGAGGAGATCATCGGCCAGGGCCAGCAGGCGCCGTCCGGTCACATCCCGTTC ACGCCGCGCGCCAAGAAGGTGCTCGAGCTGTCCCTGCGCGAGGCGCTGCAGCTGGGCCACAACTACATCGGCACCGAGCA CATTCTGCTCGGCCTGATTCGCGAGGGTGAGGGCGTCGCCGCCCAGGTGCTGGTGAAGCTGGGCGCCGAACTGACTCGGG TGCGCCAGCAGGTCATCCAGCTGCTGAGCGGATACCAGGGCAAGGAGACCGCGGAGGCCGGCACCGGCGGCCGCGGCGGC GAGGCGGGCAATCCGTCCACCTCGCTGGTGCTCGACCAGTTCGGCCGCAACCTGACCGCGGCTGCAATGGAGGGCAAGCT CGACCCCGTCATCGGCCGCGAGAAGGAAATCGAGCGGGTGATGCAGGTGCTGAGCCGGCGCACCAAGAACAACCCGGTGC TGATCGGCGAGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCGCAGGCCATCGTGCACGGCGAGGTGCCCGAG ACGCTGAAGGACAAGCAGCTCTACACGCTTGACCTCGGTTCGCTGGTGGCGGGCAGCCGCTACCGCGGTGACTTCGAGGA ACGCCTGAAGAAGGTGCTCAAGGAGATCAACACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTCGTCG GCGCGGGTGCCGCCGAGGGCGCGATCGACGCGGCCAGCATCCTCAAGCCGAAGCTGGCCCGTGGCGAGCTGCAGACCATC GGCGCCACCACCCTCGACGAATACCGCAAGTACATCGAGAAGGACGCCGCGCTGGAGCGCCGGTTCCAGCCGGTGCAGGT GGGTGAGCCGACGGTTGAGCACACCATCGAGATCCTCAAGGGGCTGCGCGACCGCTACGAGGCGCATCACCGCGTCTCGA TCACCGACGGCGCGATGGTGGCGGCCGCCACCTTGGCCGACCGGTACATCAATGACCGCTTCCTGCCGGACAAGGCGATC GACCTGATCGACGAGGCCGGTGCCCGGATGCGGATCCGCCGGATGACCGCGCCGCCAGATCTGCGCGACTTCGACGAGAA GATCGCCGAGGCGCGCCGCGAGAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGAAGGCCGCAAGCCTGCGCGACAAGG AGAAGCAACTCGTCGCGCAGCGCGCCGAGCGCGAGAAGCAATGGCGCTCAGGCGATCTCGATGTCGTCGCAGAGGTCGAC GACGAGCAGATCGCCGAGGTGCTCGGTAACTGGACCGGTATCCCCGTGTTCAAGCTGACCGAGGCCGAGACCACGCGTCT GCTGCGCATGGAGGACGAGCTGCACAAGCGGATCATCGGCCAGGAGGATGCGGTCAAGGCCGTCTCCAAGGCCATCCGGC GCACCCGTGCCGGGCTGAAGGATCCCAAGCGGCCGTCCGGCTCGTTCATCTTCGCCGGCCCGTCCGGTGTCGGTAAGACC GAGCTGTCCAAGGCGCTCGCTGAGTTCCTGTTCGGCGACGACGACGCGCTCATCCAGATCGACATGGGCGAGTTCCACGA CCGCTTCACTGCCTCGCGGCTGTTCGGTGCCCCTCCGGGCTACGTCGGCTACGAGGAGGGCGGTCAGCTCACCGAGAAGG TCCGCCGCAAGCCGTTTTCCGTGGTGTTGTTCGACGAGATCGAGAAGGCCCACCAGGAGATCTACAACAGCCTGTTGCAG GTCCTCGAGGATGGCCGCCTGACCGACGGTCAGGGTCGCACGGTCGACTTCAAGAACACCGTGCTTATCTTCACGTCGAA CTTGGGCACATCCGATATCTCGAAGGCTGTCGGCCTGGGCTTCACCCAGGGTGGCGGTGAGAACAACTACGAGCGGATGA AGCAGAAGGTCAACGATGAGCTGAAGAAGCACTTCCGGCCGGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCCAC CAGCTGACTCGCGACGAGATCATCACGATGGTCGACCTGATGATCGGCAGGGTGTCAAAGCAGCTCAAGGGCAAGGACAT GGCCATGGTCCTCACGGACAAGGCCAAGTCGCTGCTGGCCAAGCGCGGCTTCGATCCGGTGCTCGGTGCCCGGCCGCTGC GCCGCACCATTCAGCGCGAGATCGAGGACGCGCTGTCGGAGAAGATCCTCTTCGAGGAGGTCGGACCCGGCCAGCTGGTC ACGGTCGACGTCGACAACTGGGACGGCGAAGGCTCCGGCGAGGACGCGGTGTTCACGTTCACCGGAACCAAGAAGCCGGC CGAGCCGACGGAGCCGGAACTGGAGAAGGCAGGAGCCGCTGGCGCGCCGACGGCGGCAGCTTCCGAGTAG Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKETAEAGTGGRGG EAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDGAMVAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLRDFDEKIAEARREKESAIDAQDFEKAASLRDKEKQLVAQRAEREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALAEFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFH QLTRDEIITMVDLMIGRVSKQLKGKDMAMVLTDKAKSLLAKRGFDPVLGARPLRRTIQREIEDALSEKILFEEVGPGQLV TVDVDNWDGEGSGEDAVFTFTGTKKPAEPTEPELEKAGAAGAPTAAASE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 82 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mycsm_05911 | YP_007295483.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0079 | Protein | 0.0 | 60 |
| Mycsm_05911 | YP_007295483.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0080 | Protein | 6e-148 | 50 |
