Gene Information

Name : Mycsm_05874 (Mycsm_05874)
Accession : YP_007295449.1
Strain : Mycobacterium smegmatis JS623
Genome accession: NC_019966
Putative virulence/resistance : Unknown
Product : daunorubicin resistance ABC transporter ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5823854 - 5824849 bp
Length : 996 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit

DNA sequence :
ATGGCTCAACACCGTAAGGCGGTCGTCGTCGACGGGATCCGAAAGACGTTTGGCTCCGTTGTCGCCCTTGACGACATCAG
TTTTGATGTCGGTCGCGGCGAAGTGCTCGGGTTGCTCGGACCCAATGGGGCAGGCAAGACGACAACAGTGGACATTCTGT
CGACGCTGACGCGGCCGGATCACGGCTATGCGGAGGTCGCCGGCCATGACGTCGTGTCCGATCCCGCAGGAGTGCGCCGG
TCAATCATGCTGACCGGGCAGCACGTCGCCATTGACGACATGCTGACCGGTAGAGAGAACATCGTGATGTTCGGCCGATT
GCAAGGCTTGGTGAAATCGGAGGCACGGGCGCGGGCGAAGGATCTGCTCGACCACTTCGAGCTGTCCGACGCAGCCGACC
GCCGCGTCAGCACGTATTCCGGCGGGATGCGCCGGCGGATCGACATCGCGTGCGGACTCGTGATCCGTCCCGAAGTGGTG
TTCCTCGATGAACCCACAACAGGACTGGACCCTCGTAGCAGGCAAAGCATTTGGGACCTGGTCTCTGACTTCAAACAGGC
CGGCGTCGCCACGTTGCTGACTACGCAGTACCTCGAGGAGGCCGACGTGCTCAGTGACCGCATCATCGTGATCGATCACG
GCACGATCATTGCGGAGGGAACTGCCGATGAACTCAAAGAGCGTACGGGAGCGACCTACTGCGAGATCGTCCCGCGCGAT
TTGAAGGATGTGCCCGCGATGGCCGAGGCGCTCGGCCCCTTATTGCCCACGAATGCCCGGTCCGCGCTGACGCCTGCATC
CGACCGTATTGCGATGCCCGCACCCGAAGGGCCGAACACTCTCGTGCAGGTGCTGCGCCAGCTCGGCGCCGCCAACATCG
AGTTGCTCGACATCGCTCTGCGGCGGCCATCACTTGACGAGGTATTCCTCGCGCTGACAACCGAAAGCAACGGTGGGACG
CCCGCGAAACGCGGTGAAGCGGTGATGCTTTCGTGA

Protein sequence :
MAQHRKAVVVDGIRKTFGSVVALDDISFDVGRGEVLGLLGPNGAGKTTTVDILSTLTRPDHGYAEVAGHDVVSDPAGVRR
SIMLTGQHVAIDDMLTGRENIVMFGRLQGLVKSEARARAKDLLDHFELSDAADRRVSTYSGGMRRRIDIACGLVIRPEVV
FLDEPTTGLDPRSRQSIWDLVSDFKQAGVATLLTTQYLEEADVLSDRIIVIDHGTIIAEGTADELKERTGATYCEIVPRD
LKDVPAMAEALGPLLPTNARSALTPASDRIAMPAPEGPNTLVQVLRQLGAANIELLDIALRRPSLDEVFLALTTESNGGT
PAKRGEAVMLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2054 YP_005163495.1 methionine import ATP-binding protein Not tested Not named Protein 2e-60 46
CDCE8392_1976 YP_005134507.1 methionine import ATP-binding protein Not tested Not named Protein 2e-60 46