Gene Information

Name : Mycsm_05178 (Mycsm_05178)
Accession : YP_007294784.1
Strain : Mycobacterium smegmatis JS623
Genome accession: NC_019966
Putative virulence/resistance : Unknown
Product : daunorubicin resistance ABC transporter ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5126210 - 5127193 bp
Length : 984 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: daunorubicin resistance ABC transporter ATP-binding subunit

DNA sequence :
GTGTCGGTCTGGGCCGATACCGTCGGTGGCATGACACCCGCGATCGAGGCCATTGACTTGGTCAAGAGATTCGGCGAAAA
CACCGCCGTCGACGGTGTCAGCTTCGCGGTTCCACCGGGCACTGTGCTCGGCCTGCTGGGGCCCAACGGCGCGGGCAAGA
CGACCACGGTGCGGATGATGACGACCCTGACGCCGCCGACCAGCGGCGCCGCCCGGGTCGCGGGCTATGACGTCGTGCGC
GAGCCGGACAAAGTGCGCCGCAGCATGGGCCTGACGGGTCAGGTCGCCACCGTCGACGAACTGCTCACCGGCCGCGAGAA
CATCCGGATGATCGGCGGGTTGTACGGCATTCGGCGCAAGGAGTTGGCGCGACTGGGAGACCAACTGCTGGAACAGTTTT
TGATCGCCGACGCTTCCGACCGCGTGGTCAAGTCGTATTCCGGCGGCATGCGTAGGCGGCTCGACCTTGCCGTCAGCCTG
CTGGCGTCGCCGCCGGTGTTGTTTCTCGACGAGCCGACCACCGGGTTGGATCCCCGCAGCCGCAGTGACTTGTGGGAGGT
GTTGCGTGGCCTCGTTCAGGGTGGCACGACGCTCCTGCTGACCACGCAGTATCTCGAGGAAGCCGATCAGCTCGCCGACA
ACATCGTGGTGATCGACAAGGGCCGCATCATCGCCGAGGGTTCGCCGTTGCAGCTCAAGGATCAGGCGGGCAAGGCGAGC
CTGGTGGTCACGGTTTCGGACGCCGACGATCTGCCGGCTGCACAGGCGTTGCTGGGCAAGACGGGTGCCGAGGTGTTCGT
CGACACGGGTGCCCGCCGGCTCACCGCAGCGGCCGACGGCCTGGCAGACATGATCCAGGTCGCGGGGTGGCTGCGCGACA
GTGACATCGATGTCGACGACATAGGCCTGTCCCGGCCCAGCCTCGATGACGTGTTCTTGTCGCTCACCGGACACCGCACC
GAAGAGGAAGAGGTAGACGCATGA

Protein sequence :
MSVWADTVGGMTPAIEAIDLVKRFGENTAVDGVSFAVPPGTVLGLLGPNGAGKTTTVRMMTTLTPPTSGAARVAGYDVVR
EPDKVRRSMGLTGQVATVDELLTGRENIRMIGGLYGIRRKELARLGDQLLEQFLIADASDRVVKSYSGGMRRRLDLAVSL
LASPPVLFLDEPTTGLDPRSRSDLWEVLRGLVQGGTTLLLTTQYLEEADQLADNIVVIDKGRIIAEGSPLQLKDQAGKAS
LVVTVSDADDLPAAQALLGKTGAEVFVDTGARRLTAAADGLADMIQVAGWLRDSDIDVDDIGLSRPSLDDVFLSLTGHRT
EEEEVDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2054 YP_005163495.1 methionine import ATP-binding protein Not tested Not named Protein 8e-39 46
CDCE8392_1976 YP_005134507.1 methionine import ATP-binding protein Not tested Not named Protein 8e-39 46