Gene Information

Name : Mycsm_05136 (Mycsm_05136)
Accession : YP_007294744.1
Strain : Mycobacterium smegmatis JS623
Genome accession: NC_019966
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5084061 - 5084753 bp
Length : 693 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGACCCCGCAGAAGACCAGGGTGCTGGTCATCGACGACGAACCACAGATCCTGCGCGCGTTGCGAATCAACCTTTCGGT
GCGCGGCTACGAGGTGTTTATCGCCGCCAGCGGCGCCGAGGCTCTCAGAACTGCGGCCGACCACCGTCCCGACGTCATCG
TGCTGGACCTGGGCCTGCCCGATATGTCCGGCATCGAGGTGCTCGAGGGTTTGCGCGGCTGGCTGACCGCACCGGTGATC
GTGTTATCGGCACGCACCGATTCGTCGGACAAGGTCGAGGCACTGGATGCGGGTGCCGACGACTATGTCACCAAACCCTT
TGGGATGGACGAATTCCTGGCCCGGCTGCGGGCCGCGGTGCGCCGCGGCGCCGCCGCGTCCGACACCGACGAGCCTGTGA
TCGAAACGTCGTCATTCACCGTGGACCTCGCCGCGAAGAAGGTGACAAAGAACGGCACAGAGGTCCACCTGACGCCCACC
GAGTGGGGCATGCTGGAGATGATGGTGCGTAACCGCGGCAAGCTCGTCGGCCGCGAGGAGTTGCTCAAGGAAGTGTGGGG
ACCGGCCTACGCCAAGGAAACCCATTATCTGCGCGTGTATTTGGCGCAGCTGCGACGCAAGCTGGAAGACGACCCGTCAC
GTCCGGTTCACCTACTGACCGAAGCCGGAATGGGCTACCGCTTCCAGGAGTGA

Protein sequence :
MTPQKTRVLVIDDEPQILRALRINLSVRGYEVFIAASGAEALRTAADHRPDVIVLDLGLPDMSGIEVLEGLRGWLTAPVI
VLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAVRRGAAASDTDEPVIETSSFTVDLAAKKVTKNGTEVHLTPT
EWGMLEMMVRNRGKLVGREELLKEVWGPAYAKETHYLRVYLAQLRRKLEDDPSRPVHLLTEAGMGYRFQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-38 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 1e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycsm_05136 YP_007294744.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 1e-30 41