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Name : Mycsm_00451 (Mycsm_00451) Accession : YP_007290308.1 Strain : Mycobacterium smegmatis JS623 Genome accession: NC_019966 Putative virulence/resistance : Unknown Product : hydroxymethylpyrimidine synthase Function : - COG functional category : - COG ID : - EC number : - Position : 490514 - 492076 bp Length : 1563 bp Strand : - Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC DNA sequence : ATGACGCTGCTTGATTCCGCTTCTGTTTCTGTCACCACCGGCCCGATCGTGGGCAGCACCAAGATCTACGTCGACGGGGT TCCGTTTCGGCGGGTGAATCTGACCAACGGCGAGTACCTGGATCTGTACGACACCTCCGGTCCGTACACCGATCCGGACG CGGAGATTGATCTGCACCGAGGCTTGTCGCCGCGCCCCGGTGTTGTCCGCGAAGAGGGCACGCAGTTGCAGCGCGCCCGT AATGGTGAGATCACCGCGGAGATGGCGTTCATCGCCGCCCGCGAAGGCATGCCCGCCGAGCTGGTTCGCGACGAGGTCGC CGCCGGTCGCGCGGTGATCCCGGCCAACCACAACCACCCGGAGAGCGAGCCGATGATCATCGGTAAGGCGTTCGCGGTGA AAATTAATGCCAACATTGGCAATTCGGCTGTCACAAGCTCCATCGCCGAAGAGGTCGACAAGATGGTGTGGGCTACGCGC TGGGGCGCCGACACCATCATGGATCTGTCGACCGGCCGCAACATCCATGAGACGCGCGAATGGATCCTGCGCAATTCGCC GGTCCCCGTCGGCACCGTCCCGATCTACCAGGCCCTCGAAAAAGTCAATGGCGATCCCACCCAACTCAGCTGGGAGGTCT ACCGCGACACCGTGATCGAGCAATGCGAGCAGGGTGTGGACTACATGACCGTGCACGCCGGCGTGCTGCTGCGCTACATT CCGCTGACCGTCAAGCGCGTCACCGGCATCGTCAGCAGGGGCGGCTCGATCATGGCGGCCTGGATGCTGGCGCATCACAG CGAGTCGTTCCTCTACACGAATTTCGCGGAGCTCTGCGAGATCCTGGCCCGCTACGACGTCACCTTCTCGCTGGGTGACG GCCTGCGTCCAGGCTCGATCGCCGACGCCAACGACGAGGCGCAGTTCTCGGAGCTGAGAACGCTTGGCGAGCTGACCAAG ATCGCGAAAGCCCATGGCGTGCAGGTGATGATCGAGGGGCCGGGCCACATCCCCATGCACAAGATCGTCGAGAACGTGCG CCTCGAAGAGGAGCTCTGCGAGGAGGCGCCGTTCTACACCCTCGGCCCGCTGGCCACCGACATCGCGCCCGGCTATGACC ACATCACCAGCGCCATCGGGGCCTCGATCATCGCCCAGGCCGGCACCGCGATGCTGTGCTATGTCACACCCAAGGAGCAC CTGGGCCTGCCGGACCGCAACGACGTCAAGGTCGGCGTGATCACCTACAAGATCGCTGCGCACGCAGCCGATCTCGCGAA GGGGCACCCGCGTGCGCAGGAGCGTGACGACGCATTGTCAAAGGCCCGCTTCGAGTTTCGCTGGCACGACCAGTTCGCGC TGTCACTCGATCCGGACACCGCGCGCGAATTCCACGACGAGACACTGCCCGCGGAGCCCGCCAAGACCGCGCACTTCTGC TCGATGTGCGGGCCGAAGTTCTGCTCGATGCGCATCACCCAGGACATCCGCGACGCGATGGCAGAGAAGTCCAGGGAGTT CGCCGAACACGGAAACCAGGTCTATCTACCCTTGGCTACATGA Protein sequence : MTLLDSASVSVTTGPIVGSTKIYVDGVPFRRVNLTNGEYLDLYDTSGPYTDPDAEIDLHRGLSPRPGVVREEGTQLQRAR NGEITAEMAFIAAREGMPAELVRDEVAAGRAVIPANHNHPESEPMIIGKAFAVKINANIGNSAVTSSIAEEVDKMVWATR WGADTIMDLSTGRNIHETREWILRNSPVPVGTVPIYQALEKVNGDPTQLSWEVYRDTVIEQCEQGVDYMTVHAGVLLRYI PLTVKRVTGIVSRGGSIMAAWMLAHHSESFLYTNFAELCEILARYDVTFSLGDGLRPGSIADANDEAQFSELRTLGELTK IAKAHGVQVMIEGPGHIPMHKIVENVRLEEELCEEAPFYTLGPLATDIAPGYDHITSAIGASIIAQAGTAMLCYVTPKEH LGLPDRNDVKVGVITYKIAAHAADLAKGHPRAQERDDALSKARFEFRWHDQFALSLDPDTAREFHDETLPAEPAKTAHFC SMCGPKFCSMRITQDIRDAMAEKSREFAEHGNQVYLPLAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 3e-150 | 70 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 3e-150 | 70 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 5e-146 | 63 |
