Gene Information

Name : Mycsm_04043 (Mycsm_04043)
Accession : YP_007293705.1
Strain : Mycobacterium smegmatis JS623
Genome accession: NC_019966
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3968680 - 3969879 bp
Length : 1200 bp
Strand : -
Note : PFAM: Transposase IS116/IS110/IS902 family; Transposase

DNA sequence :
GTGACAGCATCACCGCGCGTCGTCATCGGCGCAGACACCCATCTGGACACCGTCCACCTCGCCGTCATCACCGACTCCGG
AAAGACGTTGGCAGACAATGAGTTCCCGACGAGTCCGGCCGGCTACCATGACGCGCTGGAATGGGCGCGCAGCTTCGGCG
CCATCGCGATCGCCGGCGTGGAAGGGACGTCGAGTTACGGCGCGGGACTGACCCGGGTTCTGCAGGCCGCCGGCGTCGAG
GTCGCCGAGGTCAGCCGCCCGGACCGCGCTGCCCGACGCCGTCAAGGCAAGTCCGATCCGTTGGACGCCTACGCCGCCGC
GCGAGCTGCACTGGCTGGTTATGGCATCGCCGTGCCCAAAGACGCCAGCACCGCGGCGCTGCGAGCTCTGTTGAGTGCAC
GACGCAGCGCCGTCAAGGCGCACACCGCGGCGACCAACCAGATCAAGGCTCTGCTGGTGACCGGACCCGCCGAGCTTCGC
GAGCGCTACCGCCACCACAGCACCCCCGCCTTGATCGGCGCCTTGGCCCGGTGCCGACCCGCCGCTCACCGCGACCCGAC
CACCATCGCGGTGTTGACCGCGGCCAAATCGCTCGCACAACGCGCGGCCTTCCTCGAAGAGCAGAAGCAGGAGTTGACCG
ACCATCTCGAACTCCTTGTCCGACAGATCAATCCGGCACTGCGCGCCGCCTACGGTGTCGGTACCGACACCGCCGCCCAA
CTGCTGGTGACCGCCGGCACCAACCCCCACCGGTTCCGCAACGAGTCGTCCTTCGCCGCGCTGTGCGGGGCGGCCCCGGT
GCCGGCCTCGTCGGGCAAGATCACCCGCCACCGGCTGTCACGTGGTGGTGACCGAGCTGCCAACAACGCCCTGTACCGAA
TCGCACTGGTCCGTATGTCCGCACACCGGCAGACCCGCGACTACGTCGAGCGTCAGATGGCCAAGGGGCGCACCAAGAGG
GAGATCCTGCGTCTCCTTAAACGGGCCATCGCCCGCGAAGTCTTCAGACTGCTGACCCGCCCCGTTCCAGTCGACGACTA
CGGCGACCTGCGGCCCGCCCGGCAAGCCAAAAACCTCACGCTAGCCACGGTGGCCACCCACTTCGGCGTTCCGATCATCA
CCATCTCGCGGCTGGAACGCGGATGCCAACGCAACGACACCCTCGTCAACGACTACCGCCAGTGGCTCACCGCCGCTTGA

Protein sequence :
MTASPRVVIGADTHLDTVHLAVITDSGKTLADNEFPTSPAGYHDALEWARSFGAIAIAGVEGTSSYGAGLTRVLQAAGVE
VAEVSRPDRAARRRQGKSDPLDAYAAARAALAGYGIAVPKDASTAALRALLSARRSAVKAHTAATNQIKALLVTGPAELR
ERYRHHSTPALIGALARCRPAAHRDPTTIAVLTAAKSLAQRAAFLEEQKQELTDHLELLVRQINPALRAAYGVGTDTAAQ
LLVTAGTNPHRFRNESSFAALCGAAPVPASSGKITRHRLSRGGDRAANNALYRIALVRMSAHRQTRDYVERQMAKGRTKR
EILRLLKRAIAREVFRLLTRPVPVDDYGDLRPARQAKNLTLATVATHFGVPIITISRLERGCQRNDTLVNDYRQWLTAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2612 YP_002152326.1 transposase Not tested Not named Protein 1e-60 48
CDPW8_0234 YP_005141813.1 transposase-like protein Not tested Not named Protein 1e-62 45