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Name : Mycsm_03069 (Mycsm_03069) Accession : YP_007292793.1 Strain : Mycobacterium smegmatis JS623 Genome accession: NC_019966 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase (class II) Function : - COG functional category : - COG ID : - EC number : - Position : 3012932 - 3016228 bp Length : 3297 bp Strand : - Note : PFAM: tRNA synthetases class II (D, K and N); Uncharacterized conserved protein (DUF2156); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGACCGCCACGTTGACGCGTCGGGCCTCCCGCTACTCATGGGTGCCCGCAGCCGCCGGCTGGACGGTCGGCATCATTGC CACGCTGTCGTTGATCGCCAGCGTCTCACCGGGAATCCGGTGGGTGATCAAGGAGCCCCGCGAGTTCGTCAACAACTACA TCTTCAACTTCCCCGACACCAGCTTCGCGTGGGCCTTCGTGCTGGCGCTGCTCGCGGCGGCGTTGGCAGCCCGCAAGCGG ATCGCATGGTGGATCCTCATCGGCTACATGGTCGCGTCGATCGGGTGGAACGTCGGCGGATTGGTCACGAGCCCCAAGTC GGTGATGGACGACATCGGCGAAGTGATCGGGGTGGCGTTCCACGTCACGTCGATCCTGTGCCTGGTCCTGGCCCGCAAGG AATTCTGGGCGAAGGTGCGCCGCGGAGCATTGCTGAAGGCGGTGTTCACGCTGGTCGCGGCCATGGGAATCGGCACCCTC ATCGGCTGGGCCCTACTCGAGGTGTTCCCTGGCAGCCTGGCCCGCGAAGACCGCTTCCTCTACGCGCTCAACCGGGTCAG CGCCTTCGCGGGCGCCGACTCCGCCTCGTTCAGCGGCCACCCGCATGTCTTCGTCAACGCGCTGCTCGGCCTGTTCGGCG CGGTCGCGCTGATGGTGACCGCGATCGTGCTGTTCCAGTCGCAGCGCGCCGACAACGCGCTCACCGGCGAGGACGAATCA GCCATCCGCGGGCTGTTGGAACTGTTCGGAAAGAACGACTCACTTGGCTATTTCGCCACCCGCCGCGATAAGGCCGTGGT CTTCGCCTCCAACGGCCGGGCGGCCATCACCTATCGCGTCGAGGTCGGCGTCTGCCTCGCCAGCGGCGACCCCGTCGGCG ATCCGAAGGCGTGGCAGCAAGCCATCCATGCGTGGCTAGAGCTGTGCCAGACGTACGGCTGGGCGCCCGGCGTGATGGGG GCCAGCTCGACGGGCGCGGAGGCGTTTCGGCAGGCGGGCCTCAACGCGCTGCAACTCGGCGACGAGGCCATCCTGTATCC CGACAGCTTCCGGCTCTCCGGACCCGAAATGCGGGCAGTGCGCCAGGCCGTGACGCGGGCGCGACGGGCAGGTGCAACCG TCCGGATTCGACGGCACCGAGATCTGTCCAGCGAGGAAATGGCCAAGGTCATCGTGCGTGCGGACACGTGGCGCGACACC GAAACCGAGCGCGGCTTCTCGATGGCGCTTGGCAGACTCGGCGACTCCGCTGACGGCGACTGTCTGCTGGTGGAAGCTGT GCAAAACGATCAAGTCGTGGCGATGCTGTCGCTGGTCCCGTGGGGCAACAACGGCGCGTCGCTCGACCTGATGCGCCGCT CACCGCAGTCCCCCAACGGAACCATCGAATTGATGGTCAGCGAGCTATGCATGCAATCCGAAGGCATTGGGGTGACCCGG ATTTCGCTGAACTTCGCGATGTTCCGGACGGCATTCGAACACGGCGCACAGCTCGGGGCGGGCCCTGTCGCGCGGCTGTG GCGTGGCCTGTTGGTGTTCTTCTCCCGGTGGTGGCAGCTCGAGACGCTGTACCGGTCGAACATGAAATACCTGCCGCAGT GGGTGCCGCGGTACGCCTGCTACGAAGACGCCCGCCTTGTGCCCCGCGTCGGTGTCGCATCGGTGATCGCCGAAGGCTTC CTGGTGCTGCCGTTCTCGCGACGCGCTGAGCAACCGCATACCGGCCATCACATCTCGGCTCCCGAAAACCTGGTCGCGAC AGGGCTTTTGCGCCATGACGGCAGCGCGCCCGACCTCGGCGAGCTAGAGGCCGACCTCCCCGAGGCCGACGACGGAGCGC GACTGCCTGAGCAGGTGCGCGTCCGGATGGCCAAGTTGAAGTCGTTGCAAGACAACGGCGTCGACGCATACCCCGTCGGC GAGGCGCCCAGCCACACCGTCGCGCAGGCAGTCGACTCCGAGGGCGCAGGCACCGTGACCGTCGCAGGGCGGGTGCTTCG CATCCGCGACTACGGCGGCGTGCTGTTCGCGCAGTTGCGCGACTGGTCGGGCGAAGTGCAGCTGCTGCTTGACAATTCGA TCCTTGAAGACGGATCTACCGCGGATTTCACCCAGGCCATCGATCTTGGCGACCTGATCCAGGTGTCCGGGACCATGGGC TACAGCAAGAAGGGCACCCGCTCGCTGCTTGTTCTCAGTTGGCGACTGATCGGCAAGTGCCTGCGCCCGCTGCCCGATAA GTGGAAGGGGCTGACCGACCAGGAGTCGCGGGTACGGGCCCGCTACGTCGACCTGGCGATCAACACCGAGGCCCGCGAGC TGATCCGAGCGCGCAGCGGGGTGCTGCACGCGATCCGCGAAACCCTGGTCGGCAATGGGTTTTTGGAGGTCGAAACCCCG ATCCTGCAGCAGATCCACGGCGGTGCCAACGCCAGGCCGTTCCTCACCCACATCAACGCCTACGATCTCGATCTGTATCT GCGCATCGCGCCCGAGCTGTATCTCAAGCGGCTGTGCGTCGGCGGTGTCGAGCGGGTCTTCGAGCTTGGTCGCGCGTTTC GCAACGAGGGTGTCGACTTCAGCCACAACCCCGAGTTCACACTGCTGGAGGCCTATCAGGCGCACGCCGACTACAACGTC TGGATCGGTGGCTGCCGCGAGCTGATCCAGAACGCCGCGCAGGCCGCCAACGGCGCACAGGTCTTCATGCGTCCTCGCGA GGACGGCACGCTGGAACCCGTCGACATCTCCGGGGAGTGGACGGTGAAGACCGTGCACGGCGCGGTGTCCGAGGCGCTCG GCGAGCAGATCGGGCCCGACACGAATCTGGCCGTGCTGCGCAAGCTTTGCGATGCGGCAGGCATCCCGTACCTGACCCAC TGGGATGCGGGCGCGGTGGTGCTCGAGCTTTACGAACGGTTGGTCGAGGACCGTACCGAGGCGCCGACTTTCTACAAGGA CTTCCCCACCTCGGTATCGCCGCTGACCCGGCCGCATCGCAGCATCCCCGGGGTCGCCGAGCGCTGGGATCTGGTGGCGT GGGGGGTGGAGTTGGGCACCGCCTACAGCGAGCTGACGGATCCCGTCGAGCAGCGCCGACGGCTGCAGGAGCAGTCGCTG CTGGCCTCGGGCGGCGATCCCGAGGCGATGGAACTCGACGAAGACTTCCTGCAGGCAATGGAGTACGCGATGCCGCCGAC GGGCGGCCTCGGCATGGGTGTCGACCGGGTGGTCATGCTGATTACCGGACGCAGCATCCGCGAAACGCTGCCGTTCCCCT TGGCCAAACCGCGCTAG Protein sequence : MTATLTRRASRYSWVPAAAGWTVGIIATLSLIASVSPGIRWVIKEPREFVNNYIFNFPDTSFAWAFVLALLAAALAARKR IAWWILIGYMVASIGWNVGGLVTSPKSVMDDIGEVIGVAFHVTSILCLVLARKEFWAKVRRGALLKAVFTLVAAMGIGTL IGWALLEVFPGSLAREDRFLYALNRVSAFAGADSASFSGHPHVFVNALLGLFGAVALMVTAIVLFQSQRADNALTGEDES AIRGLLELFGKNDSLGYFATRRDKAVVFASNGRAAITYRVEVGVCLASGDPVGDPKAWQQAIHAWLELCQTYGWAPGVMG ASSTGAEAFRQAGLNALQLGDEAILYPDSFRLSGPEMRAVRQAVTRARRAGATVRIRRHRDLSSEEMAKVIVRADTWRDT ETERGFSMALGRLGDSADGDCLLVEAVQNDQVVAMLSLVPWGNNGASLDLMRRSPQSPNGTIELMVSELCMQSEGIGVTR ISLNFAMFRTAFEHGAQLGAGPVARLWRGLLVFFSRWWQLETLYRSNMKYLPQWVPRYACYEDARLVPRVGVASVIAEGF LVLPFSRRAEQPHTGHHISAPENLVATGLLRHDGSAPDLGELEADLPEADDGARLPEQVRVRMAKLKSLQDNGVDAYPVG EAPSHTVAQAVDSEGAGTVTVAGRVLRIRDYGGVLFAQLRDWSGEVQLLLDNSILEDGSTADFTQAIDLGDLIQVSGTMG YSKKGTRSLLVLSWRLIGKCLRPLPDKWKGLTDQESRVRARYVDLAINTEARELIRARSGVLHAIRETLVGNGFLEVETP ILQQIHGGANARPFLTHINAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAHADYNV WIGGCRELIQNAAQAANGAQVFMRPREDGTLEPVDISGEWTVKTVHGAVSEALGEQIGPDTNLAVLRKLCDAAGIPYLTH WDAGAVVLELYERLVEDRTEAPTFYKDFPTSVSPLTRPHRSIPGVAERWDLVAWGVELGTAYSELTDPVEQRRRLQEQSL LASGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITGRSIRETLPFPLAKPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 6e-153 | 42 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-153 | 42 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-153 | 42 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 2e-153 | 42 |
