Gene Information

Name : Mycsm_02993 (Mycsm_02993)
Accession : YP_007292721.1
Strain : Mycobacterium smegmatis JS623
Genome accession: NC_019966
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.1.40
Position : 2934776 - 2936206 bp
Length : 1431 bp
Strand : +
Note : PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase

DNA sequence :
ATGCTTCTCGGCGTGAATAGACGCGGGAAAATCGTCTGTACGCTCGGTCCGGCCACTGCCACCGACGAGACCTTGACGGC
TCTGGTTGAGGCCGGGATGGACGTCGCACGGCTCAACTTCAGCCACGGCGACTACGCCGATCACGAGGCCAACTACAAGC
GGGTTCGCGCCGCTTCCGACCTGACTGGGCACGCCGTCGGCATCATGGCCGACCTACAGGGCCCCAAGATCCGCCTTGGT
CGATTCAAGGACGGTCCGACCTTCTGGGCCAACGGCGAAACGGTGCGCATCACCGTCGATGACTGCGAAGGCTCCCACGA
CCGGGTGTCCACCACCTACAAGCGACTGGCCCAGGACGCCACGCCAGGAGACCGGGTGCTCGTCGACGACGGCAACGTGG
GCCTCCTCGTTGACACCATCGAGGGCAACGACGTCGTCTGCACCGTCACCGAGGGCGGGCCGGTCAGTAACAACAAGGGC
ATGTCGCTGCCCGGCATGAATGTGTCCGCCCCCGCGCTGTCGGGCAAGGACATCGACGACCTCGAATTCGCGTTGAAGCT
CGGCGTCGACCTCGTCGCGTTGTCGTTCGTCCGCTCGCCCGCAGACATCGAACTCGTGCACGAGATCATGGACCGCGTCG
GCAGGCGGGTTCCGGTGATCGCCAAGCTCGAAAAACCGGAAGCCATCGACAATCTCGAGGCGATCGTGCTGGCATTCGAC
GCGATCATGGTGGCCCGCGGTGACCTCGGCGTCGAACTGCCGCTCGAGGAAGTGCCGCTGGTGCAGAAGCGTGCCATCCA
AATGGCAAGGGAGAACGCCAAACCCGTCATCGTCGCCACTCAGATGCTGGAGTCGATGATCGAGAATTCGCGGCCGACCC
GCGCCGAAGCGTCCGACGTCGCCAACGCCGTGCTCGACGGCGCGGACGCGGTGATGCTCTCGGGTGAGACGTCGGTCGGC
AAGTTCCCGCTCGAAGCCGTCAAGACGATGGCTCGCATCATCCATGCGGTCGAGGAGAATTCGGTGGCCGCACCGCCTCT
CGCGCACGTGCCGCGCACCAAGCGCGGCGTCATCTCGTATGCGGCCCGCGATATCGGCGAACGCCTGGACGCCAAGGCAC
TTGTGGCCTTCACCCAATCCGGCGACACCGTGCGCAGGCTTGCGCGGTTGCACACCCCGCTGCCGGTGCTGGCGTTCACG
TCCCTGCCCGAGGTGCGCAGCCAATTGGCGCTGACGTGGGGCACCGAGACGTTCATCGTGCCGCATATCGCCAGTACTGA
CGGCATGATCCGCCAGGTGGACAAGTCGCTGCTGGAGCTCGGCCGCTACAAGCGCGGCGAGCTGGTGGTCATCGTCGCGG
GCGCACCGCCTGGCACAGTAGGCTCCACGAACCTGATCCACGTGCACCGGATCGGGGAGGAAGACGTTTAG

Protein sequence :
MLLGVNRRGKIVCTLGPATATDETLTALVEAGMDVARLNFSHGDYADHEANYKRVRAASDLTGHAVGIMADLQGPKIRLG
RFKDGPTFWANGETVRITVDDCEGSHDRVSTTYKRLAQDATPGDRVLVDDGNVGLLVDTIEGNDVVCTVTEGGPVSNNKG
MSLPGMNVSAPALSGKDIDDLEFALKLGVDLVALSFVRSPADIELVHEIMDRVGRRVPVIAKLEKPEAIDNLEAIVLAFD
AIMVARGDLGVELPLEEVPLVQKRAIQMARENAKPVIVATQMLESMIENSRPTRAEASDVANAVLDGADAVMLSGETSVG
KFPLEAVKTMARIIHAVEENSVAAPPLAHVPRTKRGVISYAARDIGERLDAKALVAFTQSGDTVRRLARLHTPLPVLAFT
SLPEVRSQLALTWGTETFIVPHIASTDGMIRQVDKSLLELGRYKRGELVVIVAGAPPGTVGSTNLIHVHRIGEEDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 3e-65 42
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-65 42
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-65 42
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycsm_02993 YP_007292721.1 pyruvate kinase VFG0479 Protein 5e-66 42