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Name : Mycsm_02873 (Mycsm_02873) Accession : YP_007292603.1 Strain : Mycobacterium smegmatis JS623 Genome accession: NC_019966 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 2815178 - 2817268 bp Length : 2091 bp Strand : - Note : PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast DNA sequence : GTGACCACTCTCGACGAGATCTCCACCCTCACTCGTCCGAATCACCCCGACGACTGGACCGAGCTGGACTCGCAGGCGGT GGACACGGTCCGCGTGCTGGCGGCGGATGCGGTGCAGAAGGTGGGCAACGGCCATCCGGGCACAGCGATGAGCCTGGCGC CCCTTGCCTACACGCTGTTTCAGCGCCAGCTGCGCCACGACCCCAGCGACCCGCACTGGCTCGGTCGCGACCGCTTCGTG CTGTCATGCGGACACTCCAGCCTCACGCTGTACATCCAGCTGTATCTGGGTGGGTTCGGGCTGGAACTGTCCGACATCGA GTCGCTGCGCACGTGGAAGTCCAAGACGCCGGGCCATCCGGAGTTCCGCCACACCAAGGGTGTGGAGATCACCACCGGCC CGCTGGGCCAGGGGCTTGCCTCGGCCGTCGGAATGGCGATGGCCTCGCGCTACGAGCGCGGCCTGTTCGACCCGGATGCC GCGCCGGGCACCAGCCCGTTCGACCACTACATCTACGTGATCGCCTCCGACGGCGACATCGAAGAGGGCGTCACCAGCGA AGCGTCATCATTGGCGGGCACCCAGCAGCTGGGCAACCTGATCGTGTTCTACGACCACAACGAGATTTCGATCGAGGACG ACACCAACATCGCGTTGAGCGAGGACACCGCCGCCCGCTACCGCGCATACGGGTGGCATGTGCAACAGGTCGAGGGCGGC GAGAACGTGGTCGGCATCGAGGAGGCCATCGCCGAGGCCAAGCGGGTCACCGACAAGCCTTCGTTCATCTCGCTGCGCAC GATCATCGGCTATCCCGCGCCCGAGCTGATGAACACCGGCAAGGCGCACGGAGCCGCGCTGGGCGACGAAGAGGTCGCGA AGGTCAAGGAGATCCTCGGCTTTGACCCGGACAAGACATTCGAAGTGCGCGACGAGGTCATCGAGCACACCCGCAGGCTG GTCGCGCGCGGCAAGGAAGCACACGAGAAATGGCAGAGCGAGTTCGACGCGTGGGCCCAGCGCGAACCCGACCGCAAGGC GCTGCTGGACCGGCTGACTGCGGAGGAACTGCCCGACGGCTGGGATGCCGACCTGACCTATTGGGAGCCGGGTTCCAAGC CGCTGGCCACCCGCGCGGCCTTCGGTCAGGTACTCAACGACGTCGCACCGAAACTGCCCGAATTGTGGGGCGGCTCAGCG GATCTCGCTGGCAGCAACAACACCACGATAAAGGGCGTCAAGTCGTTCGGCCCCGCATCAATCTCCACGAAGGAGTTCAC CGCGGACCCCTACGGCCGCGTGCTGCACTTCGGCGTCCGCGAACACGCGATGGGGTCGATCCTGTCGGGCATCGTGCTGC ACGGGCCGACACGCGCGTTCGGCGGCACCTTCCTGCAGTTCTCGGATTACATGCGCCCGGCAGTGCGGTTGGCGTCGCTG ATGAACATCGACACCATCTATATCTGGACGCACGACTCGATCGGCCTCGGCGAGGACGGTCCCACCCACCAGCCGATCGA ACACCTGGCGGCACTGCGGGCCATCCCCAACCTGTCGGTGGTGCGACCAGGCGACCCGAACGAGACCGCGTACGCGTGGC GCACGATCATCGCGCGTGGCGCGACAGCCGGCCCGGTCGGTTTCATCCTCACCCGACAGGGCATCCCAGTACTGGAGGGC ACCGACGCTGAAGGGGTTTCCAAGGGTGGTTACGTGCTCGGTGGTGCACCTGATGAGGACCCCGACGTGGTGCTGATTGG TACGGGGTCGGAGCTGCAGTTGGCCGTGGCCGCACAAAAGATATTGGCCGACAAGGGAATCACCGCGACGGTGGTCTCGA TGCCATGCGTCGAGTGGTTCGAATCTCAGCCGGCGGAGTACCGCAACAGCGTGCTTCCCCCGGCGGTGTCAGCGCGTGTT GCGGTGGAGGCCGCAGTCGCGCAGAGCTGGTACAAACTGGTCGGCGACACCGGCGAGATCGTCTCGATTGAGCACTACGG CGAGTCGGCCGACGACAAGACGTTGTTCCGCGAGTTCGGTTTCACCCCAGAGGCAGTGGTGGCCGCCGCAGAACGATCAC TAGATAATTAG Protein sequence : MTTLDEISTLTRPNHPDDWTELDSQAVDTVRVLAADAVQKVGNGHPGTAMSLAPLAYTLFQRQLRHDPSDPHWLGRDRFV LSCGHSSLTLYIQLYLGGFGLELSDIESLRTWKSKTPGHPEFRHTKGVEITTGPLGQGLASAVGMAMASRYERGLFDPDA APGTSPFDHYIYVIASDGDIEEGVTSEASSLAGTQQLGNLIVFYDHNEISIEDDTNIALSEDTAARYRAYGWHVQQVEGG ENVVGIEEAIAEAKRVTDKPSFISLRTIIGYPAPELMNTGKAHGAALGDEEVAKVKEILGFDPDKTFEVRDEVIEHTRRL VARGKEAHEKWQSEFDAWAQREPDRKALLDRLTAEELPDGWDADLTYWEPGSKPLATRAAFGQVLNDVAPKLPELWGGSA DLAGSNNTTIKGVKSFGPASISTKEFTADPYGRVLHFGVREHAMGSILSGIVLHGPTRAFGGTFLQFSDYMRPAVRLASL MNIDTIYIWTHDSIGLGEDGPTHQPIEHLAALRAIPNLSVVRPGDPNETAYAWRTIIARGATAGPVGFILTRQGIPVLEG TDAEGVSKGGYVLGGAPDEDPDVVLIGTGSELQLAVAAQKILADKGITATVVSMPCVEWFESQPAEYRNSVLPPAVSARV AVEAAVAQSWYKLVGDTGEIVSIEHYGESADDKTLFREFGFTPEAVVAAAERSLDN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 2e-115 | 44 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 3e-117 | 43 |
