|
Name : Mycsm_01392 (Mycsm_01392) Accession : YP_007291209.1 Strain : Mycobacterium smegmatis JS623 Genome accession: NC_019966 Putative virulence/resistance : Virulence Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Function : - COG functional category : - COG ID : - EC number : - Position : 1393576 - 1394262 bp Length : 687 bp Strand : + Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal DNA sequence : ATGGACACCATGAGGCAAAGGATTCTGGTTGTCGATGACGACCCGTCGCTGGCCGAGATGCTCACCATCGTCTTGCGCGG CGAAGGTTTCGACACCGCGGTCATCGGCGACGGCACGCAGGCTCTCACGGCGGTCCGCGAGCTGCGGCCCGATCTGGTGT TGCTTGACCTGATGCTGCCGGGCATGAACGGCATCGACGTATGCCGCGTTCTGCGCGCCGACTCCGGTGTGCCGATCGTC ATGCTGACAGCCAAGACCGACACCGTCGACGTGGTGCTCGGCCTCGAGTCGGGCGCCGACGACTACGTGATGAAGCCTTT CAAGCCCAAGGAACTTGTCGCGCGAGTGCGAGCCCGGCTGCGCCGCAACGAGGACGAGCCCGCCGAGATGCTCTCGATCG CCGACATCGACATCGACGTGCCCGCCCACAAGGTCACCCGGCAAGGTGAGCAGATTTCCCTGACACCGCTGGAGTTCGAC CTGTTGGTGGCGTTGGCGCGCAAACCACGGCAGGTGTTTACTCGTGATGTGCTGCTCGAACAGGTGTGGGGATACCGGCA CCCCGCCGACACCCGTTTGGTAAACGTGCATGTCCAACGTTTGCGGGCCAAGGTTGAGAAAGACCCGGAGAACCCGCAGG TGGTCCTGACCGTTCGAGGAGTGGGATACAAGGCCGGACCCCCGTGA Protein sequence : MDTMRQRILVVDDDPSLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIV MLTAKTDTVDVVLGLESGADDYVMKPFKPKELVARVRARLRRNEDEPAEMLSIADIDIDVPAHKVTRQGEQISLTPLEFD LLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPQVVLTVRGVGYKAGPP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 7e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AE000516.2.gene3505. | Protein | 2e-85 | 97 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002952.2859905.p0 | Protein | 7e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_009782.5559369.p0 | Protein | 7e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002951.3237708.p0 | Protein | 7e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_003923.1003749.p0 | Protein | 5e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002758.1121668.p0 | Protein | 7e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_009641.5332272.p0 | Protein | 7e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_013450.8614421.p0 | Protein | 7e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007793.3914279.p0 | Protein | 7e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_007622.3794472.p0 | Protein | 7e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002745.1124361.p0 | Protein | 7e-37 | 46 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | HE999704.1.gene2815. | Protein | 9e-31 | 44 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | AE015929.1.gene1106. | Protein | 2e-25 | 43 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0125 | Protein | 6e-26 | 43 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0111 | Protein | 4e-22 | 42 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_012469.1.7685629. | Protein | 2e-31 | 42 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0197 | Protein | 2e-24 | 42 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_002695.1.916589.p | Protein | 1e-26 | 42 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | CP001918.1.gene3444. | Protein | 2e-26 | 42 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0039 | Protein | 1e-26 | 42 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | CP000034.1.gene2186. | Protein | 1e-26 | 42 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | BAC0347 | Protein | 6e-18 | 41 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | NC_012469.1.7686381. | Protein | 4e-33 | 41 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | CP004022.1.gene1676. | Protein | 2e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1390 | Protein | 3e-27 | 43 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1389 | Protein | 1e-23 | 42 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1702 | Protein | 3e-29 | 41 |
| Mycsm_01392 | YP_007291209.1 | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | VFG1386 | Protein | 1e-23 | 41 |
