Gene Information

Name : Mycsm_01247 (Mycsm_01247)
Accession : YP_007291070.1
Strain : Mycobacterium smegmatis JS623
Genome accession: NC_019966
Putative virulence/resistance : Unknown
Product : site-specific recombinase, DNA invertase Pin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1260372 - 1260959 bp
Length : 588 bp
Strand : -
Note : PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase

DNA sequence :
ATGAGTCACACCGACACCGAGCAGCGCGGCACACGCATCGGCTACACCCGCGTCTCGACGGTGTCACAGACGCTTGATCA
ACAGAATGCGGCACTAACGGCTGCCAGCGTCACTAAGACGTTCTCCGACACCATGTCTGGTGCGCGTGACGATCGCCCCG
GTCTGGCGGCCCTCATGGCTTACGTCCGCACCAGTGACACGGTCGTGGTGTGGAAGCTCGATAGGTTAGGCAGAAACCTG
TGGCACATCCTTCAAACCGTCAAGGAACTGACGGAGCGCGGTGTCACCCTGGTTTCGGTCACCGACGGGATCGATTCCTC
AACTGCCGCAGGCAGAATGATGATCGGCGTACTGGGGTCCCTCGCTGAGTACGAGCGCGAGCTGACCAAGGAGCGAACCG
CACTGAAGCGGGCAGCATCTCGCGCCAGCGGCACCAGGTTCGGTCGACCTCGTAAGGTCAACGACGCCGATCATATTGCA
ACCGCCAGAAAGATGAAGGCCGACGGGCACAATGGCAAGGACATCGCCAAGTACCTCGGGGTCAGCCGGGCGACACTATA
CCGGTACCTTGCCGACGACGCTGCTTAA

Protein sequence :
MSHTDTEQRGTRIGYTRVSTVSQTLDQQNAALTAASVTKTFSDTMSGARDDRPGLAALMAYVRTSDTVVVWKLDRLGRNL
WHILQTVKELTERGVTLVSVTDGIDSSTAAGRMMIGVLGSLAEYERELTKERTALKRAASRASGTRFGRPRKVNDADHIA
TARKMKADGHNGKDIAKYLGVSRATLYRYLADDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 3e-28 47
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 1e-30 46
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 2e-30 46
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 2e-30 46
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 4e-30 43
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 2e-30 43
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 2e-30 43