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Name : clpC (BN43_90097) Accession : YP_007289547.1 Strain : Mycobacterium canettii CIPT 140070008 Genome accession: NC_019965 Putative virulence/resistance : Virulence Product : Putative ATP-dependent Clp protease ATP-binding subunit ClpC1 Function : - COG functional category : - COG ID : - EC number : 3.4.-.- Position : 4048444 - 4050990 bp Length : 2547 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 11271494, 12657046, 15525680, 15928073, 17611072, 8655000; Product type pf : putative factor DNA sequence : ATGTTCGAACGATTTACCGACCGTGCCCGCAGGGTCGTCGTCCTGGCGCAGGAAGAGGCCAGGATGCTCAACCACAACTA CATCGGCACCGAGCACATTCTTTTAGGCCTGATCCATGAAGGGGAAGGCGTCGCCGCCAAGTCACTGGAGTCGCTGGGGA TCTCGCTGGAGGGTGTGCGCAGTCAGGTCGAGGAGATCATCGGCCAGGGCCAGCAGGCGCCGTCCGGGCACATCCCGTTT ACCCCCCGCGCCAAGAAGGTCCTCGAGCTGAGCTTGCGTGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAACA CATTTTGCTGGGCCTCATCCGGGAGGGTGAAGGCGTGGCCGCCCAGGTGCTGGTCAAGCTGGGCGCCGAGCTGACCCGGG TGCGCCAGCAGGTGATCCAGCTGCTGTCGGGCTACCAGGGCAAGGAGGCCGCCGAAGCCGGCACCGGCGGCCGCGGGGGA GAGTCCGGCTCCCCGTCTACGTCCTTGGTGCTCGACCAGTTCGGCCGCAACCTCACGGCGGCCGCAATGGAAGGCAAGCT GGACCCGGTCATCGGCCGCGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTGTCCCGGCGCACCAAGAACAACCCGGTGC TCATCGGCGAGCCCGGTGTGGGCAAGACCGCGGTCGTCGAAGGACTGGCGCAGGCCATCGTGCACGGCGAGGTGCCCGAG ACGCTCAAGGACAAGCAGCTCTACACGCTGGATCTGGGATCGCTGGTGGCGGGTAGCCGCTACCGCGGTGACTTCGAGGA ACGCCTCAAGAAGGTGCTCAAGGAGATCAACACCCGCGGTGACATCATCCTGTTTATCGACGAGCTGCACACCTTGGTCG GGGCCGGCGCCGCCGAGGGCGCGATCGACGCCGCCTCGATCCTGAAACCGAAGCTCGCTCGCGGTGAACTGCAAACGATC GGCGCCACCACGCTCGACGAATACCGTAAGTACATCGAGAAGGATGCCGCGCTGGAGCGCCGATTCCAGCCGGTGCAGGT GGGTGAGCCGACGGTGGAGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGGTACGAGGCGCACCACCGGGTGTCGA TCACCGATGCGGCGATGGTGGCCGCCGCGACCCTGGCCGACCGCTACATCAACGACCGGTTCCTGCCCGACAAGGCGATC GATCTGATCGACGAGGCGGGTGCTCGGATGCGGATTCGTCGCATGACCGCGCCGCCGGACCTACGCGAGTTCGATGAGAA GATCGCCGAGGCTCGTCGGGAGAAGGAATCGGCTATCGACGCCCAGGACTTCGAGAAGGCCGCCAGCCTGCGTGACCGGG AGAAGACATTGGTCGCACAGCGTGCTGAGCGCGAAAAGCAGTGGCGTTCAGGCGATCTTGACGTGGTCGCCGAGGTCGAC GACGAGCAGATCGCCGAGGTGCTGGGCAACTGGACCGGTATCCCGGTGTTCAAGCTCACCGAGGCCGAGACCACCCGGCT GTTGCGGATGGAAGAAGAGCTGCACAAGCGGATCATCGGGCAAGAGGACGCCGTCAAGGCCGTTTCCAAGGCCATCCGGC GTACTCGGGCTGGGCTGAAAGACCCCAAGCGCCCGTCGGGCTCGTTTATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACC GAACTGTCCAAGGCGCTGGCCAACTTCTTGTTCGGTGACGACGACGCGCTCATTCAGATTGACATGGGTGAATTCCACGA CCGGTTCACCGCGTCGCGGCTATTCGGCGCGCCGCCCGGATACGTCGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGG TGCGCCGCAAGCCGTTTTCGGTGGTGCTGTTCGACGAGATCGAGAAGGCGCATCAGGAGATCTACAACAGCCTGCTGCAG GTGCTTGAGGATGGCCGGCTCACCGACGGGCAGGGCCGTACGGTGGACTTCAAGAACACCGTGCTGATCTTTACGTCCAA TCTGGGCACCTCCGACATCTCCAAGCCGGTCGGTCTGGGCTTTTCCAAGGGCGGCGGTGAGAACGACTACGAGCGGATGA AACAGAAGGTCAACGACGAGCTGAAGAAACACTTCCGCCCGGAGTTCCTCAACCGCATCGACGACATCATCGTCTTCCAC CAGCTGACCCGCGAGGAGATCATCCGGATGGTCGACCTGATGATCAGCCGGGTCGCCGGCCAGCTCAAGAGCAAGGACAT GGCGCTGGTGCTGACCGATGCAGCCAAGGCGCTGCTGGCCAAGCGTGGCTTCGACCCGGTGTTGGGGGCCCGCCCGTTGC GGCGCACCATCCAGCGTGAGATCGAAGATCAGCTCTCGGAGAAGATCCTCTTCGAGGAGGTCGGGCCGGGTCAGGTGGTC ACCGTCGACGTGGACAACTGGGACGGTGAAGGTCCCGGCGAGGACGCGGTGTTCACCTTCACCGGTACCCGCAAGCCTCC GGCCGAGCCGGATCTGGCCAAGGCTGGAGCGCACAGCGCGGGCGGCCCGGAGCCGGCCGCGCGGTAG Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKEAAEAGTGGRGG ESGSPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSITDAAMVAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLREFDEKIAEARREKESAIDAQDFEKAASLRDREKTLVAQRAEREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFH QLTREEIIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQVV TVDVDNWDGEGPGEDAVFTFTGTRKPPAEPDLAKAGAHSAGGPEPAAR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 81 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_007289547.1 | Putative ATP-dependent Clp protease ATP-binding subunit ClpC1 | VFG0079 | Protein | 0.0 | 60 |
| clpC | YP_007289547.1 | Putative ATP-dependent Clp protease ATP-binding subunit ClpC1 | VFG0080 | Protein | 7e-140 | 51 |
