Gene Information

Name : smpB (BN43_60094)
Accession : YP_007289053.1
Strain : Mycobacterium canettii CIPT 140070008
Genome accession: NC_019965
Putative virulence/resistance : Unknown
Product : Putative SsrA-binding protein SmpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3507434 - 3507916 bp
Length : 483 bp
Strand : -
Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; PubMedId : 12777483, 15525680, 17611072

DNA sequence :
GTGTCCAAGTCGTCGCGTGGCGGCCGGCAGATCGTTGCCAGCAATCGCAAAGCCCGGCACAACTATTCGATCATCGAGGT
GTTCGAGGCCGGGGTTGCGCTGCAAGGCACGGAGGTGAAGAGCCTGCGGGAAGGGCAGGCGTCGCTGGCCGATTCGTTCG
CCACCATCGACGACGGCGAAGTGTGGCTGCGCAACGCGCACATCCCGGAATACCGGCACGGCAGCTGGACCAACCACGAG
CCGCGACGCAACCGCAAACTGCTGTTGCATCGCCGCCAGATCGACACCTTGGTCGGCAAGATCCGCGAAGGCAACTTCGC
CCTGGTGCCGTTGTCGCTGTATTTCGCCGAAGGCAAGGTCAAGGTTGAGCTTGCGCTGGCCCGAGGCAAGCAAGCCCGCG
ACAAACGCCAGGACATGGCCCGTCGTGATGCCCAGCGTGAAGTGCTCCGCGAGTTGGGTCGGCGCGCTAAGGGCATGACC
TGA

Protein sequence :
MSKSSRGGRQIVASNRKARHNYSIIEVFEAGVALQGTEVKSLREGQASLADSFATIDDGEVWLRNAHIPEYRHGSWTNHE
PRRNRKLLLHRRQIDTLVGKIREGNFALVPLSLYFAEGKVKVELALARGKQARDKRQDMARRDAQREVLRELGRRAKGMT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 5e-49 67
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 4e-32 49
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-23 43