Gene Information

Name : Halru_0919 (Halru_0919)
Accession : YP_007283673.1
Strain : Halovivax ruber XH-70
Genome accession: NC_019964
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 955009 - 955875 bp
Length : 867 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGACAGGAACTGACTCCGACGTGGTCGACCCGGACGAGGCATCGATCGGGCTCACCGACGAGGACGGCGTCGCCGTCCA
GAGCGCACTCGTCGGCGACGATCTCGACCTTCGATACCCGACGAGCGACGAATCGGTCGTCGAGTGTGCCCGTCTCGACG
TACCCGAGGGGGCGATCACCGCGCTGGTCGGCCCGAACGGGAGCGGCAAGTCGACGCTGCTGAAGGCGCTCTCCGCCCAT
CTCGAACCGGTGGCCGGGTCTGTCAGGATCCACGGCGAGGACCTCGACTCGTTCGGTGGCAAGGAACTGGCCCGCGAACT
CGGTGTCCTCTCCCAGGAGAATGACTCGGTCGGCTCCATCTCGGTCGAGGACCTCGTCTACCACGGTCGGTATCCGTACC
GCGGGTTCTTCGAGGGTGTGAGTGCGGCCGACCACGAGGCGGTCGACCGGGCGTTCGAACTCGCTGGGATCGACCACCTC
CGGGAGACGGAACTGGGCCAACTGAGCGGCGGCCAGAAACAACTGGCCTGGATCGCGATGGTCCTCGCCCAGGAGACCGA
CGTCCTCCTGCTCGACGAGCCGACCACGTTCCTGGACGTCCACCACCAGTTTCGCGTCCTCGAAACGATTCGCCAGCTGA
ACGAACAGCAGGGCGTCACCGTCGCCGTCATCCTCCACGACATCTCGCAGGCGGCCCGCTTCGCCGACTACCTGATCGCG
ATGTGCGACGGCGAACTGTACGACTGGGGCCCGCCAGAAGAGGTCGTCACCGAGTCGCTACTCGCCGACGTCTTCGGCGT
CGAAGCGACGGTCAGAACGGAGCCCGACCTGCAGGTGTTGCCGAGACGGGCGCTGCCAGAGCGGTAA

Protein sequence : 
MTGTDSDVVDPDEASIGLTDEDGVAVQSALVGDDLDLRYPTSDESVVECARLDVPEGAITALVGPNGSGKSTLLKALSAH
LEPVAGSVRIHGEDLDSFGGKELARELGVLSQENDSVGSISVEDLVYHGRYPYRGFFEGVSAADHEAVDRAFELAGIDHL
RETELGQLSGGQKQLAWIAMVLAQETDVLLLDEPTTFLDVHHQFRVLETIRQLNEQQGVTVAVILHDISQAARFADYLIA
MCDGELYDWGPPEEVVTESLLADVFGVEATVRTEPDLQVLPRRALPER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-47 45
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 6e-40 43
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-45 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-44 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-44 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-44 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-44 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-44 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-44 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-44 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-44 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halru_0919 YP_007283673.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component BAC0164 Protein 3e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halru_0919 YP_007283673.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG0925 Protein 5e-49 44
Halru_0919 YP_007283673.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG1042 Protein 3e-40 43