Gene Information

Name : Halru_2395 (Halru_2395)
Accession : YP_007285112.1
Strain : Halovivax ruber XH-70
Genome accession: NC_019964
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2420068 - 2420796 bp
Length : 729 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
GTGACACACGAGTACACGGCTGGCAGCCGGTTGCGATCGACCGGGCGCGAGCCGGTTCGTGCGCTCGCCGACGTCTCGCT
GTCGATCGCGTCCGGGGAAGTCGTCGGTATTCGGGGACCGAGCGGGAGCGGGAAGTCGACCGTCCTCCACGCGATCGCGG
GGCTGCTCGTCCCGACGGACGGGTCCGTTGCGCTCTTCGGGACCGACCTCACCGACTGTTCCGGTCGAAAGCGACTGCGA
CTCCGCCGACAACACGTCGGAATCGTCTTCCAGCACTTCCACCTCCTGCCGTCGCTCAGTGCTCGCGCGAACGTCGCCTT
GCCGCTCGTGCAACTCGGCCAGTCGAAGGCGACGCGTCGGAGACGGGCGACTGCGTTGCTAGAGCGCGTCGGCCTGGGAG
ATCGGCTCACGCACCGGCCGGGGGAGTTGAGCGGCGGCGAACGCCAGCGTGTCGCGATCGCCAGATCGCTCTCGACCGAT
CCCGACGTGATCGTCGCCGACGAACCGACGGGTGAACTCGACACGGCGACCAGCGAATCCGTTCTCGACGTCCTGACGAG
CGTCGCCGACGATCGCGCCGTCGTGATGGCGTCGCACGACCCGACGACGCTCGCGTGGACGGATCGGACGATCACCCTCT
GTGATGGGTCGATCGTCGACGAGACGGACCAGGACGAGCCACGTCGGGCGCGACCGGCGATCGGCGCAAGCGGTGGAGAC
GATCCGTGA

Protein sequence : 
MTHEYTAGSRLRSTGREPVRALADVSLSIASGEVVGIRGPSGSGKSTVLHAIAGLLVPTDGSVALFGTDLTDCSGRKRLR
LRRQHVGIVFQHFHLLPSLSARANVALPLVQLGQSKATRRRRATALLERVGLGDRLTHRPGELSGGERQRVAIARSLSTD
PDVIVADEPTGELDTATSESVLDVLTSVADDRAVVMASHDPTTLAWTDRTITLCDGSIVDETDQDEPRRARPAIGASGGD
DP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Halru_2395 YP_007285112.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 1e-28 43
Halru_2395 YP_007285112.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-38 41