Gene Information

Name : Halru_0148 (Halru_0148)
Accession : YP_007282933.1
Strain : Halovivax ruber XH-70
Genome accession: NC_019964
Putative virulence/resistance : Unknown
Product : ABC-type spermidine/putrescine transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 152886 - 153974 bp
Length : 1089 bp
Strand : +
Note : PFAM: ABC transporter; TOBE domain

DNA sequence :
ATGACCGATCTCCGCCTCGACGGCGTCTCGAAGCGCTACGACGGGGGAGGGGGAACGTCACCCGACGCGGCCGACGAATC
GGGAACGCTCGCCCTGCGCGACGCCGACCTGACGATCCGCGACGGCGAGTTCTTCACGCTCGTCGGTCCCTCCGGCTGCG
GGAAGACGACCACGTTACGGACGATCGCCGGCTTCGAGGCGCCCACGCACGGGCGTGTCTCGTTCGACGGGGACGACGTC
ACTGGCGTTGCCCCCGAACGGCGGGACGTCGGCGTCGTCTTCCAGAGCTACGCGCTCTTTCCGCACATGACCGTCGCCGA
GAACGTCGGCTACGGCCTGCGATTTCGCGATCCGCCTGCAGGCACCTCCCGCGACGACCGAATCGAGCACCTGCTCGACC
TCGTCGATCTCGCCGGGATGGGCGAGCGCGACCCGGCACAGCTCTCCGGCGGACAACAACAGCGTGTGGCCCTCGCCCGT
GCGCTCGCGCCGGAACCCTCCTTGCTCCTGCTCGACGAACCGATGAGCGCACTGGACGCTCGCCTCCGGGAGTCGCTACG
CCGACAGGTGAAACGAATCCAGACCCAGCTCGACATCACGACCGTCTACGTCACCCACGATCAGTCGGAGGCGCTGGCCA
TCTCGGACCGCCTCGCCGTCATGAACGCCGGCCGGGTCGAACAGGTTGGCCCGCCACGAGAGATCTACCGGGAACCGGCG
ACGCGCTTCGTCGCCGAGTTCGTCGGCGACAACAACGTCTTCGAGGGCACCGTCGACGAGACGACCGACGATCGGTCACG
CGTCACCGTCGACGGGTGGACGTTTTCCCTCCCGACACTCCCCGACACCGCCGACCGGGTCACGTTCTGTGTCCGGCCGG
ACGCCCTCTCGCGGGCCGTCGAGCACAATCGCTTCACCGTCGCCGTCGAAACGACCGAATTCCTCGGCGAGCGCGTCCGG
TGTAACGGTCGATGGAACGGCCGGCCGATCGTGTTGCACGTCGACGACACTATCGACGAACGGTCGCCGGACGGCGACCT
CACCGTCGGGTTCGAGCCGTCGGCTGCACACGTCGTCGACGTCGAATAA

Protein sequence :
MTDLRLDGVSKRYDGGGGTSPDAADESGTLALRDADLTIRDGEFFTLVGPSGCGKTTTLRTIAGFEAPTHGRVSFDGDDV
TGVAPERRDVGVVFQSYALFPHMTVAENVGYGLRFRDPPAGTSRDDRIEHLLDLVDLAGMGERDPAQLSGGQQQRVALAR
ALAPEPSLLLLDEPMSALDARLRESLRRQVKRIQTQLDITTVYVTHDQSEALAISDRLAVMNAGRVEQVGPPREIYREPA
TRFVAEFVGDNNVFEGTVDETTDDRSRVTVDGWTFSLPTLPDTADRVTFCVRPDALSRAVEHNRFTVAVETTEFLGERVR
CNGRWNGRPIVLHVDDTIDERSPDGDLTVGFEPSAAHVVDVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-27 41