Gene Information

Name : Natpe_3659 (Natpe_3659)
Accession : YP_007282328.1
Strain : Natrinema pellirubrum DSM 15624
Genome accession: NC_019962
Putative virulence/resistance : Virulence
Product : ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3575763 - 3576626 bp
Length : 864 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGTCACGCACACAGCAGAGCGCGGATCGAGAACAGGAGCGGATCACCGACGACGACGGCAACGCGGTCGAAAGCGCACT
GGTCGGCGACGACCTCGAACTCAGTTATCCGACGAGCGAGGAAACCATCGTCGACTGCGCGCGCCTCGACATCCCCGAGG
GAGCGGTGACCGCGCTTGTTGGACCCAACGGCAGCGGGAAGAGTACCCTTCTGAAGGCGCTCTCGAAGCATCTCGAGCCG
AACGCGGGGTCCGTACAGATACACGGCAAGGACCTCGATGCGTTCAGTCGCAAGGAACTGGCGCGCGAAATGGGTGTCCT
CTCGCAGGAGAACGACTCGCTCGGCTCGATCTCGGTCGAGGACCTCATCTATCACGGCCGCTACCCGCATCGGGGCTTTT
TCGACGGCGTCAGCGAGGAGGACCAGCAAGCGGTCGAACGTGCGATCGAGTTGGCGGGGATCGACCACCTCCGGGAGTCG
GAACTCGGTCAGCTGAGCGGCGGGCAGAAGCAACTGGCCTGGATCGCCATGGTGCTGGCACAGGACACCGACGTCCTGTT
GCTCGACGAGCCGACCACGTTTCTGGACATTCACCACCAGTTCCGCGTCCTCGAGACGATTCGACAACTGAACGAGGAAC
GGGGCGTTACGGTCGCGGTCATTCTCCACGACATCTCACAGGCGGCCCGGTTCGCGGACTATCTGGTCGCGATGTGCGAC
GGCGAACTCTACGACTGGGGGCCGCCCGAGGAAGTCGTGACGGAACAGTTGCTCGCCGATGTCTTCGGCGTCGAGGCCAC
CGTCGAGTACGAGCCCGAACTGCAGGTACTGCCGAAGCGGGCGCTTCCGGACAGCCGGACGTGA

Protein sequence : 
MSRTQQSADREQERITDDDGNAVESALVGDDLELSYPTSEETIVDCARLDIPEGAVTALVGPNGSGKSTLLKALSKHLEP
NAGSVQIHGKDLDAFSRKELAREMGVLSQENDSLGSISVEDLIYHGRYPHRGFFDGVSEEDQQAVERAIELAGIDHLRES
ELGQLSGGQKQLAWIAMVLAQDTDVLLLDEPTTFLDIHHQFRVLETIRQLNEERGVTVAVILHDISQAARFADYLVAMCD
GELYDWGPPEEVVTEQLLADVFGVEATVEYEPELQVLPKRALPDSRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-39 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 9e-45 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-44 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-44 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-44 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natpe_3659 YP_007282328.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component BAC0164 Protein 8e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natpe_3659 YP_007282328.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG0925 Protein 9e-50 44
Natpe_3659 YP_007282328.1 ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component VFG1042 Protein 7e-40 43