Gene Information

Name : Natpe_3404 (Natpe_3404)
Accession : YP_007282094.1
Strain : Natrinema pellirubrum DSM 15624
Genome accession: NC_019962
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3321820 - 3322023 bp
Length : 204 bp
Strand : +
Note : PFAM: Helix-turn-helix

DNA sequence :
ATGGAGAACGATCTCACCGTCTGGCGGGCGAAAGCCGATATCACGCAAGCCGAACTCGCCGATCAGGTCGGTGTTTCGCG
ACAGACGATCAACGCGATCGAACGCGGGCGGTACGACCCGAGCCTCGAACTCGCGTTCGAACTAGCACACTATTTCGACT
GCCGAATCGAGGACATCTTCGACTACGAGTCGGCCGACGACTGA

Protein sequence :
MENDLTVWRAKADITQAELADQVGVSRQTINAIERGRYDPSLELAFELAHYFDCRIEDIFDYESADD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 5e-10 50
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 4e-10 50
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 4e-09 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natpe_3404 YP_007282094.1 putative transcriptional regulator VFG2168 Protein 1e-10 50
Natpe_3404 YP_007282094.1 putative transcriptional regulator VFG2175 Protein 1e-10 50