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Name : Natpe_3027 (Natpe_3027) Accession : YP_007281725.1 Strain : Natrinema pellirubrum DSM 15624 Genome accession: NC_019962 Putative virulence/resistance : Virulence Product : nucleotide sugar dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 2960229 - 2961629 bp Length : 1401 bp Strand : + Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase DNA sequence : ATGACTACGATAATCAGCGATACGGAGGAGACAGCGGACGAGGGAACGAGCGGCCAGTACGCGTTCGAAACGAGCGATGA GGGAACTACCCTCGAACACCCGACGGACCGGTCCACGCGCGAAGCGACGATCTGCGTCGTCGGACTGGGGTACGTCGGAC TGCCGCTTGCGGTCGGATTCGCCCAGTCGGACTACCGCGTGATCGGATACGACGTCGACGACGTGACCGTCGGCCGACTC CAGGAGGGTGTCGACACGACCGGTGACCTCCCGGACGAGGCGATTCAGGACGGCGATATCTCCTACACGACCGACGCGAC CTCGATCGCCGAGGCCGACTACGTCATCATCGCCGTTCCGACGCCGATCGACGACGACGAGCGGCCGGACCTCGGCTACG TCGAGAGCGCGGCGGCCACCGTCGGCTCGAAGATGGAACCCGGGACGACGGTCGTCCTCGAGTCGACGGTTTACCCGGGG ACGACGCGCGAGGTCCTCGCTCCGGCACTCGAGGACGCGTCCGGACTGACCGCCGGCACGGACTTCTTCGTCGGTTACTC CCCGGAACGCGCCACGCCGGGCGACGACGAACACGGTCTCGCAGACGTCGTCAAGGTCGTCAGCGCACAGAACGAGAAAG TGCTGGAAGACCTCGCGACGCTGTACGAGTCGGTCGTCGACGCGGGCGTCCACCCCGCCCCGTCGATCGAAGTCGCCGAG GCCTGCAAAGTCGTCGAGAACGCCCAGCGGGACCTCAACATCGCGTTCGTCAACGAACTCTCGATGGCGCTCGACAACAT GGACATCGACAGTCGGGCCGTTCTCGAGGCCGCGGGCACGAAGTGGAACTTCCACGATTACCGACCGGGACTGGTCGGCG GCCACTGTATCCCGGTCGATCCGTACTTCTTCGCGTACCGATCGGCACGGGAGGGCTTTGACCCCGAACTCATGCAGACG AGTCGGCAGGTCAACGAATCGGTCCCCGATCACGTCGCGGAGCTGACGATCAAAGCGCTCAACCAGAGTCACAAGACGCT CCGCGAGAGTCGCGTTCTGGTACTCGGACTGGCGTACAAAGCCGGCGTCGGAGACATTCGCAGTTCGAAGATCGACGCCG TCATCGACGCCCTTCAGGAGTACGACATCGATATCGCCGGATACGATCCGTTCGCCGACGGCGACGCGGCCCGGGAATCG TTCGGCATCGAGGTCCAGGAACGGCTCGCGTTCGAGGGCTTCGATGCCGTCGTCCTCGCGACGCCCCACGCGGAGTTCGA ACAGTTGGATCTCGAGTCGGTAGCGAGGAAACTCACCGACGACCCCGCACTGATCGACGTGACCGGGACGGTCGGCGAAG ACGCCGCCGTCGATGCGGGATTCGTCTACCGGGGGTTGTGA Protein sequence : MTTIISDTEETADEGTSGQYAFETSDEGTTLEHPTDRSTREATICVVGLGYVGLPLAVGFAQSDYRVIGYDVDDVTVGRL QEGVDTTGDLPDEAIQDGDISYTTDATSIAEADYVIIAVPTPIDDDERPDLGYVESAAATVGSKMEPGTTVVLESTVYPG TTREVLAPALEDASGLTAGTDFFVGYSPERATPGDDEHGLADVVKVVSAQNEKVLEDLATLYESVVDAGVHPAPSIEVAE ACKVVENAQRDLNIAFVNELSMALDNMDIDSRAVLEAAGTKWNFHDYRPGLVGGHCIPVDPYFFAYRSAREGFDPELMQT SRQVNESVPDHVAELTIKALNQSHKTLRESRVLVLGLAYKAGVGDIRSSKIDAVIDALQEYDIDIAGYDPFADGDAARES FGIEVQERLAFEGFDAVVLATPHAEFEQLDLESVARKLTDDPALIDVTGTVGEDAAVDAGFVYRGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 8e-83 | 44 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-75 | 42 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 3e-75 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Natpe_3027 | YP_007281725.1 | nucleotide sugar dehydrogenase | VFG0431 | Protein | 1e-75 | 42 |
