Gene Information

Name : Natpe_2488 (Natpe_2488)
Accession : YP_007281205.1
Strain : Natrinema pellirubrum DSM 15624
Genome accession: NC_019962
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2425963 - 2427483 bp
Length : 1521 bp
Strand : +
Note : PFAM: Aldehyde dehydrogenase family

DNA sequence :
ATGGATAACGAGGAATCCCACGGAGAGATCCGGCAGCGACACCGCCGCGCGATCGACGAAGCAACTGCGGAGATCACCTT
CGGCGCTTGGATTGACGGCGAAACGCGATCGGCAAGCACCGGGGAGACCTTCCGGACGACGGACCCAGTGATCGACGAAA
CGATCGCAGAAGTCCCACGATGTACCAGCGAGGATATCGAGACTGCCGTCGACGCTGCACAATCCTCTTTCAAGGGAGAA
TGGAGCGATCTCGGAGTCACCGAGCGGTCCGCGTTGCTAAACGAGTGGGCCGATGAACTTTCGGCACACCGTGACACACT
CGGTCTTCTCGAGAGCCTCGACACGGGGAAACCACTCGAATACGCAAAAGAAGAGATCGACGGTGCGGTCGCTTTCCTCT
CGTATTATGCGGATATCGCACGGTCACACGGCGGAAAGCAGATCCCCGTTGACGGGGATTCCCTGGTGTATACACAACGC
GAACCCTACGGAGTTTGTGGACAGATCACGCCGTGGAACTTCCCCCTCTATCTTCTATCGTGGAAAGTCGGCCCCGCGCT
AGCGACCGGGAACACCGTCGTGATAAAACCCGCAGAACTCACACCGCTGACTGCTCTATACGCTGCTCAACTGTCCGAGG
GCATTCTCCCTGACGGCGTTTTGAACGTCGTTCCCGGATACGGCGAAGAGGCCGGCGCTCCACTGACGGAACACGAAGAC
GTTCGCAAGCTCGCGTTCACTGGCGAGGATCTGACCGGAGAGACGATTATGAAGGCAGCCGCGGCCAACATCACACCGGT
GACGCTTGAGCTCGGTGGGAAGAGCCCTATGATCGTGTTCCCCGATGCAGATGTCGAAACCGCTGCCGAAGCGGCCGCGG
ACGGCATCTTCTACAACACTGGGCAGGCGTGTGACGCCGCGTCGCGTATCCTCCTCCACGAGGACATTAAGGAGGAGTTC
ACGGAGGCGTTCCTCGACCACGCAGCCGACTACACCGTTGGCGATCCCCTCGAAGAGGGGACCATGATGGGCCCCCTGGC
ACATCAGGGCCAGTACGAGAAGGTCACGGACTATATCGAACTCGGGACAGAGGAAGGCGCAACCGTACTGACTGGGGGGA
GCGCTCCAGACGATCCGGACCTCGAGGACGGATGGTTCATCGAGCCGACGATCTTCGACGACGTCAGTAACGATATGAGA
ATTGCACAGGAGGAGATCTTCGGCCCAGTCGAGTGTCTCCTCACGTTCTCCGACTACGACGAAGCGATCGAGATGGCTAA
CGATATCGAGTACGGGCTCGCGGGATACGTGATCACCGAAAACGCATCCCTCGCCCATCAGGCTGCTTCGGATATCGAAG
CTGGACTGATCGCAGTTAACAAATACCCCGGCGACGACCTCGGTGTTCCGTTCGGCGGGTACAAACGCTCTGGAATCGGC
CGTGAATGCGCTGAAGAAACGCTCGATCACTATACGCAGACGAAAACGGTCAACATGCGACTCGACGAGCCCGAGCTATA
G

Protein sequence :
MDNEESHGEIRQRHRRAIDEATAEITFGAWIDGETRSASTGETFRTTDPVIDETIAEVPRCTSEDIETAVDAAQSSFKGE
WSDLGVTERSALLNEWADELSAHRDTLGLLESLDTGKPLEYAKEEIDGAVAFLSYYADIARSHGGKQIPVDGDSLVYTQR
EPYGVCGQITPWNFPLYLLSWKVGPALATGNTVVIKPAELTPLTALYAAQLSEGILPDGVLNVVPGYGEEAGAPLTEHED
VRKLAFTGEDLTGETIMKAAAANITPVTLELGGKSPMIVFPDADVETAAEAAADGIFYNTGQACDAASRILLHEDIKEEF
TEAFLDHAADYTVGDPLEEGTMMGPLAHQGQYEKVTDYIELGTEEGATVLTGGSAPDDPDLEDGWFIEPTIFDDVSNDMR
IAQEEIFGPVECLLTFSDYDEAIEMANDIEYGLAGYVITENASLAHQAASDIEAGLIAVNKYPGDDLGVPFGGYKRSGIG
RECAEETLDHYTQTKTVNMRLDEPEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 7e-80 42
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 8e-75 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-75 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-75 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-75 41
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-64 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-75 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Natpe_2488 YP_007281205.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 3e-75 41