Gene Information

Name : Natpe_1876 (Natpe_1876)
Accession : YP_007280643.1
Strain : Natrinema pellirubrum DSM 15624
Genome accession: NC_019962
Putative virulence/resistance : Unknown
Product : P-type ATPase, translocating
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1840922 - 1843078 bp
Length : 2157 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC

DNA sequence :
ATGACAGAAGTCACGATAACAATAGATACGGAACAACAGAAGCAGGCATTCAGAGACTCGTTCGTCAAGCTCGATCCGCG
GCACTTAGTTCGGAACCCGGTGCTGTTCGTAGTCGAGCTGGGGACGATCGTCAGTCTGCTGTTAACGATCGCTCCCGGAC
TGTTCGATGCGACGGGTTCGCGCGTCTACTACGGCGTGATCACCGCACTGCTCGCGTTCACCGTGCTGTTCGCGAACTAC
GCTGAGGCGTACGCTGAGCTCGAAGGCGAGGCCCAGGCGGATAGTCTGCGCGCTTTGCAGACCGAGACCAAGGCGAAGCA
GCTCATAGAACCCGATACCCCCATCGAAGAGATTGACGATGGCGACATCGAGATTGCAGACAGCAATGAAATCGAGGCCG
GCGAAGTCGTCTTCGTCGATGAAGGTGACGTCATACCCCGCGACGGGACCGTTATTGAGGGGAGCGCATCGGTCGACGAG
TCTGCGATTACCGGTGAGTCCGACCCGGTCATTCGACAGTCCGGCGGGGATCGGACTTCGGTCGTCGGTGGAACGGAAGT
TCTCTCAGACTGTCTCAAGGTCGAAGTGACCTCGGAGCAGGGCGAGTCGTTCCTCGACGAGATGATCGGTCTCGTTGAGA
ACGCCCAGCGGCAGAAGACGCCCAATGAGGTCGCTATGACGATCCTGTTGAGTGGTCTGACATTGGTGTTCGTCGTCGCA
GTCGCGACGATGTTCTTCTTCGGTGAGTATCTGGCTTCGTTTACAGTTGGGTTCGCTGGCCTGGACATCGCTGAGCTCGT
GGCGCTGTTGATTGCGCTCATGCCGACCACGATCGGTGCGTTACTGGCCGCGATTCGTGTTGCGGGGATGACGCGTGTTA
CGCGCCGCAACGTCATCGCGAAGTCCGGTCGCGCGGTTGAGGCGGCCGGTGACTTGGACGCACTCATCCTCGACAAAACA
GGGACGATCACGACCGGCGAGCGTGTCGCTCAGGATTTCCACTCGCTCGGTGACGCGAACGATGAGGACGTTATTCGTGC
GAGCTACCAGTCGTCACTGTTCGACGAGACGACGGAAGGCCGTTCGATTATCGACCTCGCAGAGAAGATGAACGGGACGA
AGGCTGACGGTGGCCAACCGGATGGCGATGCCGTCGATGAACCAGGAGCTGCTGTGGAAGCACCCCGTGATGTCGACGTC
TCTCTGGGCACTGAGAGCCTCTCTGAGGAGAACTTTGTCCCGTTCTCAGCAGAAACACGGATGAGCGGTATCAACCTTCC
TGACGGAACCGAAATTCGGAAGGGCGCCGTCGATGCGGTCGAGAAGTACGCCGATAGCGCTCCCGGAAAACTACGGCAAC
CCTCCAACGATATCAGTGAAAGTGGTGGGACTCCGCTTGCGGTTGCGGTCGACAAGCAGGTCGTCGGAATCATCGAGCTG
CAGGACGAACTGAAACCCGGTATTGCCGACCGAATCGCCGAAATCCAGAAGATGGGTGTCGAGACGATTATGGCGACTGG
GGACAACCAACGGACGGCTCGTTGGGTTGCCGACCAAGTTGGCATCGATGAGTTCCACGCCGAATTCGGTCCCGAGGAGA
AAATTGAACTCGTCGAAGATATCCAAGCCGACGGGAAACTCGTCGGGATGACCGGAGACGGCACGAACGACGCTCCGGCA
CTCGCGAAGGCAGACGTCGGTCTCGCAATGAATGCGGGGACCAACGCGGCGAAGGAGGCGGGCAATATGGTCGACCTCGA
CTCGAACCCTTCGAAGATTATCGAGGTCGTCGGGATCGGCAAACAGCTCCTAATGACCCGTGGTGCACTGACCACATTCT
CAGTCGCCAACGACGTGGCGAAGTACTTCGTGTTGCTGCCTGCGATCCTCGCGGCTGCGATCCCGGGACTGGCTGCGATG
GACATCCTGAACCTGTCGACCCCTGCGAGTGCGGTGACGGCGACGCTGGTGTACAACGCGTTCATCATCCCGCTACTCAT
CCCGCTCGCGCTGCGTGGTGTCGACTATGAGGCTCAGAGCGGTGCACAGCTCTTGCGAAAGAACCTCATCGTCTACGGTG
GCGGCGGACTCATCGCTCCGTTCATCTTCATTAAGATGATCGACATGCTGTTCGTCGCGCTGGGGGTGTTCCAATAA

Protein sequence :
MTEVTITIDTEQQKQAFRDSFVKLDPRHLVRNPVLFVVELGTIVSLLLTIAPGLFDATGSRVYYGVITALLAFTVLFANY
AEAYAELEGEAQADSLRALQTETKAKQLIEPDTPIEEIDDGDIEIADSNEIEAGEVVFVDEGDVIPRDGTVIEGSASVDE
SAITGESDPVIRQSGGDRTSVVGGTEVLSDCLKVEVTSEQGESFLDEMIGLVENAQRQKTPNEVAMTILLSGLTLVFVVA
VATMFFFGEYLASFTVGFAGLDIAELVALLIALMPTTIGALLAAIRVAGMTRVTRRNVIAKSGRAVEAAGDLDALILDKT
GTITTGERVAQDFHSLGDANDEDVIRASYQSSLFDETTEGRSIIDLAEKMNGTKADGGQPDGDAVDEPGAAVEAPRDVDV
SLGTESLSEENFVPFSAETRMSGINLPDGTEIRKGAVDAVEKYADSAPGKLRQPSNDISESGGTPLAVAVDKQVVGIIEL
QDELKPGIADRIAEIQKMGVETIMATGDNQRTARWVADQVGIDEFHAEFGPEEKIELVEDIQADGKLVGMTGDGTNDAPA
LAKADVGLAMNAGTNAAKEAGNMVDLDSNPSKIIEVVGIGKQLLMTRGALTTFSVANDVAKYFVLLPAILAAAIPGLAAM
DILNLSTPASAVTATLVYNAFIIPLLIPLALRGVDYEAQSGAQLLRKNLIVYGGGGLIAPFIFIKMIDMLFVALGVFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-122 48
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-122 48
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-122 48
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 3e-122 48
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 4e-122 48
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-122 48
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 1e-118 48
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-118 48