Gene Information

Name : Prede_1332 (Prede_1332)
Accession : YP_007278683.1
Strain :
Genome accession: NC_019960
Putative virulence/resistance : Unknown
Product : site-specific recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1683635 - 1684561 bp
Length : 927 bp
Strand : -
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD

DNA sequence :
ATGAAAACAGCCCATAACCATCCCGTGGACGACATGGTTCGCCGCTATGTGCGCTACCTGAAGCTGGAGCGCAACTACGC
CGATAACACGCTGGAGGCCTATCGTCACGACCTGACCCATCTGCTCGGCTATCTCGGCACGCAACGGCTGGGGCCGCTCG
AAGTGAAGCTGGAACACCTGCAACATTTTGCCGCCACGCTTCACGAGCGCGGCATCGGGGCCAAGTCGCAGGCACGCATC
CTTAGCGGCGTGCGGGCTTTCTACCGCTATCTGGTGCTCGACGGCTACCTGGAGGTGGACCCCACGGAGCTGCTGGAGTC
GCCCCATCTGCCTCGCCACCTGCCCGAATATCTCACTACGGCCGAGGTGGATGCACTGGAAGACAGTATCGACCTTTCGA
CCAACGAGGGCCATCGCAACCGTGCCATCATCGAGGTTTTGTTCTCCTGCGGACTGCGTGTGTCCGAACTCACCCACCTG
CGCCTCTCTTGTCTCTATGCCGAGGAGCGGTTCATCCGCGTGCTGGGCAAGGGCAACAAGGAGCGGTTGGTGCCCATTTC
CGACCGTGCCCTGCACGAGCTCGACCTCTGGTTTGACGACCGCCGCAAGATGAACATCCAGCCGGGCGAGGAAGACTACG
TGTTTCTGAACCGGCGCGGCCACCATCTCACGCGCGTGATGATACTCATCATGATTAAGCGTCAGGCCGAATTGGCCGGC
ATTCACAAGACCATTTCGCCCCACACACTGCGCCACTCGTTTGCCACGGCCCTGCTGCGGGGCGGCGCCGACCTGCGCGT
CATCCAGGCCCTGCTGGGCCATGCCGACATCGGCACCACCGAAATCTACACCCACATGGACGATGAGTCGCTGCGGCAAG
AGATTCTGCAGCACCATCCGCGCAACATTGCGCGCGGATGCAAGTGA

Protein sequence :
MKTAHNHPVDDMVRRYVRYLKLERNYADNTLEAYRHDLTHLLGYLGTQRLGPLEVKLEHLQHFAATLHERGIGAKSQARI
LSGVRAFYRYLVLDGYLEVDPTELLESPHLPRHLPEYLTTAEVDALEDSIDLSTNEGHRNRAIIEVLFSCGLRVSELTHL
RLSCLYAEERFIRVLGKGNKERLVPISDRALHELDLWFDDRRKMNIQPGEEDYVFLNRRGHHLTRVMILIMIKRQAELAG
IHKTISPHTLRHSFATALLRGGADLRVIQALLGHADIGTTEIYTHMDDESLRQEILQHHPRNIARGCK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-37 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-37 44