Gene Information

Name : VPBB_0885 (VPBB_0885)
Accession : YP_007274563.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Unknown
Product : Aspartate aminotransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 967913 - 969127 bp
Length : 1215 bp
Strand : -
Note : Equivalent to RIMD VP0927 putative aspartate aminotransferase

DNA sequence :
ATGCAAAATATCGGGATGTCGTCAAAACTCGACAATGTCTGCTACGACATTAGGGGTCCTGTACTCAAACATGCTAAGCG
CATGGAGGAAGAAGGGCATAAAATCCTAAAGTTGAACATTGGTAACCCTGCCCCATTTGGTTTTGACGCCCCTGATGAGA
TTCTTGTAGATGTAATTCGTAATCTACCGACCTCTCAAGGCTACTGTGATTCCAAAGGCATTTACTCTGCGCGTAAAGCG
GTGGTTCAACATTACCAACGCAAAGGCATTCGTTCTTTAGACGTAGAAGATGTGTACGTCGGTAATGGCGTGTCGGAGCT
GATCGTGATGGCAATGCAAGCGCTGCTAAACAACGGCGATGAAATGCTCATCCCTGCGCCTGACTACCCATTGTGGACGG
CATCAGTAGCGTTGTCTGGTGGCAACCCCGTTCATTATTTGTGTGATGAACAATCGGATTGGTATCCAGACCTTGATGAC
ATCAAAAAGAAAATCACGCCGAAGACCCGCGGTATTGTTCTGATCAACCCGAACAACCCAACAGGTGCTGTATATAGTCG
TGACTTCTTACTAGAGGTGATTGAGATTGCTCGCCAGCACAAGCTGATCATTTTCGCTGACGAGATTTACGACAAAGTGC
TTTACGATGGCGCAACACACACTTCTGTTGCGACGCTAACGGAAGACGTACTTGTGATGACCTTCAACGGGTTGTCGAAA
GCTTACCGTGTATGTGGTTTCCGCGGTGGGTGGATGTTCTTAACTGGTCCAAAACACTTAGCACAAGGCTACGTTAACGG
TCTAGAGTTGCTCTCTTCTATGCGTCTTTGTGCCAACGTGCCGATGCAACATGCGATTCAAACCGCGCTAGGTGGCTACC
AAAGTATCAATGAGTTGATCTTACCTGGTGGCCGATTGCTAGAGCAGCGTAATCGCGCGTTCGAGCTGATCAACCAGATC
CCAGGGGTATCTTGTGTGAAACCCAAAGGTGCCATGTACTTATTCCCTAAAATCGATACCAAGATGTACAACATCAAGAA
TGACCAGCAGATGGTGCTCGATTTCTTGAAACAGGAAAAAGTACTGCTAGTACAAGGCTCAGGCTTTAACTGGCCAAAAC
CAGACCATTTCCGCATTGTGACTTTGCCACACGTTGAAGATCTGGAAACCGCAATCGGACGCTTCGAGCGATTCCTATCA
ACCTACAGCCAGTAA

Protein sequence :
MQNIGMSSKLDNVCYDIRGPVLKHAKRMEEEGHKILKLNIGNPAPFGFDAPDEILVDVIRNLPTSQGYCDSKGIYSARKA
VVQHYQRKGIRSLDVEDVYVGNGVSELIVMAMQALLNNGDEMLIPAPDYPLWTASVALSGGNPVHYLCDEQSDWYPDLDD
IKKKITPKTRGIVLINPNNPTGAVYSRDFLLEVIEIARQHKLIIFADEIYDKVLYDGATHTSVATLTEDVLVMTFNGLSK
AYRVCGFRGGWMFLTGPKHLAQGYVNGLELLSSMRLCANVPMQHAIQTALGGYQSINELILPGGRLLEQRNRAFELINQI
PGVSCVKPKGAMYLFPKIDTKMYNIKNDQQMVLDFLKQEKVLLVQGSGFNWPKPDHFRIVTLPHVEDLETAIGRFERFLS
TYSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-129 64
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-129 64
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-129 64
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-129 64