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Name : VPBB_0615 (VPBB_0615) Accession : YP_007274301.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : tmRNA-binding protein SmpB Function : - COG functional category : - COG ID : - EC number : - Position : 672557 - 673042 bp Length : 486 bp Strand : - Note : Equivalent to RIMD VP0644 small protein B DNA sequence : ATGGCAAAGAAAAAATCAAAACAAAAAGCGGGTAGTAACACTATCGCGCTGAACAAAAAAGCTCGCCACGAGTATTTCAT TGAAGATGAAATCGAAGCTGGCTTGGAGCTCCAAGGTTGGGAAGTGAAAGCCCTTCGCCAAGGTAAAGCCAATATTTCTG AAAGTTACGTATTCATGCGTGACGGTGAAGCCTTTGTGAGTGGCATGACAATCACTCCTTTAAATCAGGCATCGACACAC GTAGTGGCGAACCCTACTCGTGTGCGCAAACTACTTATGAGTCGTCGTGAACTTGACAACCTACTCGGTCGCATTAACCG TGAAGGTATGACACTTACGGCACTCTCTCTGTACTGGTCTCGCTCTTGGGTGAAGATAAAAATAGGTGTAGCAAAAGGTA AAAAGCTTCACGATAAACGTACAGATCTTAAAGAAAAAGACTGGGCAAGAGAAAAAGCACGCGTAATGAAGAGCGCACTG CGTTAA Protein sequence : MAKKKSKQKAGSNTIALNKKARHEYFIEDEIEAGLELQGWEVKALRQGKANISESYVFMRDGEAFVSGMTITPLNQASTH VVANPTRVRKLLMSRRELDNLLGRINREGMTLTALSLYWSRSWVKIKIGVAKGKKLHDKRTDLKEKDWAREKARVMKSAL R |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 4e-58 | 87 |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 2e-18 | 44 |
