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Name : VPBB_0043 (VPBB_0043) Accession : YP_007273744.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : Dipeptide transport ATP-binding protein DppD Function : - COG functional category : - COG ID : - EC number : - Position : 52195 - 53910 bp Length : 1716 bp Strand : + Note : Equivalent to RIMD VP0047 peptide ABC transporter, ATP-binding protein DNA sequence : ATGTCACTATTAGAGGTGAAAAACCTTCGTATTGAGTATCCATCCCGACACGGCGTTCACGCGGCCGTGAAATCACTTTC GTTTAATATTGAACGAGGTGAAATCGTGGGTGTTGTTGGCGAATCCGGTGCGGGTAAGTCCACCGTTGGTAACGCCGTTA TCGATTTGCTGAGCCCTCCGGGACGCGTTGCCAGTGGCGATGTCTTTTTGGATGGTGAAAAAATATCTGGCTTAACACCA GAAGCGATGCGTAAGGTGCGTGGCTCGAAGATTGGTTTTATCTTCCAAGACCCTATGACCTCTCTTAACCCTTTGTTTAC GGTTGAGCAGCAGCTAAAAGAAACCATTCATGCCAACATGAAAGTGTCTGACGACGAGGCGTATCAACGCGCGTTGTCTC TGATGCAGCAAGTCGGCATCCCTCAGCCTGAAAACCGTCTTAAACAGTATCCTCACCAGTTTTCTGGTGGTATGCGTCAG CGTGTGGTTATCGCGATCGCTTTGGCTGGTGAGCCAGATCTGATCATCGCCGATGAGCCAACCACGGCACTGGACGTATC AATCCAAGACCAAATCCTGAATCTTATCCGTGAGTTGTGTATCCAGAACAATGTTGGTTGTATGTTGGTTACGCACGACA TGGGGGTGGTTTCAAACGTTACAGACCGCGTGGCGGTGATGTACCGTGGCGATCTTGTTGAGTTTGGGCCAACGGCAAAA GTGTTGGGTAACCCAGATCACCCATACACGCGCAGCTTGATTTCGGCGGTTCCTCGCTCAGACAGAAAGCTCGATCGTTT CCCTCTGGTGAGTTACATCGAAGAAGCGACAGAAATGAAGTCGCTAGACATTAAGAATCACTGGCTGGGTCAAAGCCAAG ATCAGCGTGAGTACACTGGCCCGTTGTTGGATGTGAAAAACGTCAACCTAAGGTTTGTGACTAAGGACTCTTTGTTTGAA AGCCGCCGTGAGTACGTGCAGGCATCGAACAATGTGAGTTTTGAAGTGCACGAAGGTGAGACGTTTGGTCTGGTGGGTGA GTCAGGTTCGGGTAAGTCGACCATCGCGCGCGTGATTGCTGGCTTGTATGAGCCAAACTCTGGCCAAGTGAAATTTGAAG GCATCGATCTCACGGCGATGAAGTCGGAAAAAGAGCGTCGTCCGATGCGACGTCAAATGCAGATGGTGTTCCAAAACCCA TACACGTCTATGAACCCTCGTATGAAGGTGTCAGACATTATTGCCGAGCCAATTCGTTTCCATAAACTCACCAAGAATGA AGCAGAAACACGTCAAATCGTGAATGATTTGCTTGATCATGTTGGTTTGGGTCGCATGGCTGGCGTGAAATATCCTCATG AATTCTCTGGTGGTCAGCGTCAGCGTATTTCGATTGCGCGCGCTCTGGCCACTCGTCCTCGACTTTTGATTTGTGATGAA CCGACATCAGCGTTGGATGTGTCGGTACAGGCACAAATTCTGAACTTGCTAAAAGATCTGCAAAGTGAACTGAACCTAAC GATGTTGTTTATCAGTCACGATTTACCGGTGATTCGTCAGATGTGTGACCGAGTGGGTGTAATGCAGATGGGCACGTTAT TGGAAGTCGCGCCTACCGAGCAGCTCTTTACTGCTCCGCAGCACGAATACAGCAAAAAATTGATCTCTCTAATGCCTGAA TTTACGGGCTTGCGAGAAGAAATCAAAACGGCATAA Protein sequence : MSLLEVKNLRIEYPSRHGVHAAVKSLSFNIERGEIVGVVGESGAGKSTVGNAVIDLLSPPGRVASGDVFLDGEKISGLTP EAMRKVRGSKIGFIFQDPMTSLNPLFTVEQQLKETIHANMKVSDDEAYQRALSLMQQVGIPQPENRLKQYPHQFSGGMRQ RVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRELCIQNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK VLGNPDHPYTRSLISAVPRSDRKLDRFPLVSYIEEATEMKSLDIKNHWLGQSQDQREYTGPLLDVKNVNLRFVTKDSLFE SRREYVQASNNVSFEVHEGETFGLVGESGSGKSTIARVIAGLYEPNSGQVKFEGIDLTAMKSEKERRPMRRQMQMVFQNP YTSMNPRMKVSDIIAEPIRFHKLTKNEAETRQIVNDLLDHVGLGRMAGVKYPHEFSGGQRQRISIARALATRPRLLICDE PTSALDVSVQAQILNLLKDLQSELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTAPQHEYSKKLISLMPE FTGLREEIKTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-104 | 42 |
