|
Name : VPBB_0490 (VPBB_0490) Accession : YP_007274179.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : Lysyl-tRNA synthetase (class II) Function : - COG functional category : - COG ID : - EC number : - Position : 525843 - 527360 bp Length : 1518 bp Strand : + Note : Equivalent to RIMD VP0513 lysyl-tRNA synthetase, heat inducible DNA sequence : ATGACTGATGCTGTTCAAAACGAAACTGTACAAGAAGAAAACAAGCTGATTGCTGAGCGCCGCGCTAAACTGGACGAAAT CCGAAAGAGCTGCAAAGCAAACGGCCACCCAAACGACTTCCGTCGTGACGCACTAGCGGGCGACCTTCAAAAAGAGTTCG GTGAAAAGACTAAGGAAGAGCTAGAAGAGCTTAACCACGTAGTAGCGATCGCTGGTCGTATTATGGCAAAACGTGGTCCA TTCCTAGTAATTCAAGAAACATCTGGCCGTATCCAAGCTTACGCAGACAAAGAAGTTCAAAAAGAACTGAAAGAGAAATA CCAAGGTCTTGATATCGGTGACATCATCGGTGTTAAAGGTGCGCTACACAAATCTGGTAAAGGCGACCTATACGTGAACA TGGAAGAGTACGAGTTGCTAACAAAAGCACTTCGTCCACTTCCTGAGAAGTTCCACGGTCTGACTGACCAAGAAATGCGT TACCGTCAGCGTTATGTAGACCTAATCGTTAACGAAGATTCTCGTAATGCATTCGTTGTACGTTCTAAAGTTATGTCTGC AATTCGTAACTTCATGATCTCTAAACAGTTCATGGAAGTTGAAACGCCAATGATGCACGTGATCCCTGGTGGTGCAAGTG CACGTCCATTCATCACGCATCACAACGCGCTAGACATGCCAATGTACCTGCGTATTGCGCCTGAGCTATACCTGAAGCGT CTAGTTGTTGGTGGCTTTGATCGCGTATTCGAAATCAACCGTAACTTCCGTAACGAAGGTCTTTCTCCACGTCACAACCC TGAATTCACAATGATGGAATTCTACATGGCGTACGCGGATTACAAAGATCTAATGGACTTCACTGAAGAACTACTAAGCT CTGTAGCACTAGAAGTTCTGGGTTCAACATCAATGCCTTACGGTGAAGATACTGTTGAGTTTGGCGGTAAGTACGCTCGC ATGAGCATGTTTGAAGCAATCAAACACTACAACCCAGACCACGCTCAAATCCAAGCGCTAACGGAAGAAGATCTACAAAA CCGCGAACTAATGGTTTCTATCGCGAAATCTGTTCACGTTGAAGTAGAACCTTTCTGGACTTGTGGTCAGCTTCTTGAAG AGATCTTCGGTGAAACTGCAGAACCTAAACTAATGCAGCCTACGTTCATCACTGGCTACCCAGCGGATATTTCTCCACTG GCACGTCGTAGCGATGACAACCCATTCTTCACAGACCGCTTTGAGTTCTTCATCGGTGGCCGTGAAGTAGCAAACGGCTT CTCAGAGCTTAACGATGCAGAAGACCAAGACGCGCGCTTTAAAGCACAGGTTGAAGCAAAAGAATCTGGTGATGACGAAG CGATGTTCTACGATGCAGACTACATCACTGCACTAGAACACGGTCTACCACCAACAGCAGGTCAAGGTATCGGTATCGAC CGCCTAGTTATGCTGCTAACTAACACGCACACCATCCGTGACGTGATCTTGTTCCCTGCAATGCGCCCACAAGCGTAA Protein sequence : MTDAVQNETVQEENKLIAERRAKLDEIRKSCKANGHPNDFRRDALAGDLQKEFGEKTKEELEELNHVVAIAGRIMAKRGP FLVIQETSGRIQAYADKEVQKELKEKYQGLDIGDIIGVKGALHKSGKGDLYVNMEEYELLTKALRPLPEKFHGLTDQEMR YRQRYVDLIVNEDSRNAFVVRSKVMSAIRNFMISKQFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKR LVVGGFDRVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDFTEELLSSVALEVLGSTSMPYGEDTVEFGGKYAR MSMFEAIKHYNPDHAQIQALTEEDLQNRELMVSIAKSVHVEVEPFWTCGQLLEEIFGETAEPKLMQPTFITGYPADISPL ARRSDDNPFFTDRFEFFIGGREVANGFSELNDAEDQDARFKAQVEAKESGDDEAMFYDADYITALEHGLPPTAGQGIGID RLVMLLTNTHTIRDVILFPAMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-129 | 59 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-78 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_0490 | YP_007274179.1 | Lysyl-tRNA synthetase (class II) | VFG1668 | Protein | 3e-129 | 59 |
