|
Name : VPBB_0379 (VPBB_0379) Accession : YP_007274072.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : Putative hemolysin Function : - COG functional category : - COG ID : - EC number : - Position : 392177 - 393925 bp Length : 1749 bp Strand : - Note : Equivalent to RIMD VP0372 putative hemolysin DNA sequence : ATGGATAGTTCGACCCCTTTTCGTCTCCCTCGTAAAACGCCGTTTGGCATTGGTGAAAACGTTGCAGAATGGGCTACGGG TTTAAGTCAGCTCGATAAATTCTACGCCCAACGCCCCGTGAATACGGATACCAAAACTTTCTTGCGATTCACACTGGATA TTTTGGGTATCGACTATCGCATTGCCCATGGATCGCTCGACGCAGTGCCAAAGCAAGGCGCAACCGTCATTGTGGCGAAT CACCCTCTCGGCTGTGTTGAAGGCGTGATTCTCGCCGAACTACTGTTGATGGTACGAGACGATATCCAAATTTTAGCGAA TCAGTACCTGAAAACCGTGCCAGAGCTCGACCAACTTTTTATTGGTGTCGACGTATTCGAGGGCAAAGATGCGGTCAAGT CGAACATGAAGGCACTTAGAGCAGCCAATAAACACCTTGCGAATGACGGCTTGTTATTGGTTTTCCCTGCGGGTGAAGTG TCGCAGTTGGTGGATGCCAAACAACAGCGTTTAGAAGACAAAGAATGGAGCCGCAGTGTCAGCGCGTTAATTCGTAAGAA CAAAGCCGCCACTGTTCCTGTATTCATTTGTGGGCAGAACTCAAAACGCTTCTACATGGCAGGTAAAATCCACCCTCTTT TACGCACCTTGATGTTAGGAAGAGAGCTGCTCAACAAGAGCGCAAAAACTATTGAGTTGTCCTTTGGGGAAGCAATCAAG TTTAAAGAACTCAATAACCTCAACGATGATCAGATCGTCAATTATCTAAGGCTCAACACCTACCTGCTTAACCGCGATGT AAGTGCCACTCAGCAAACGGTCTCAGACAATGATCTCTTACCTATTGCGGCAGGGTTACCCATAGGCCAATTGCTTGAAG AGCTGCACAACTTACCGGCAGAAACCCAATTGCTTCAAAGTGGCGAGTTCGACGTGTACTGCGCCAGTGCGCAGCAGATC CCATCTCTCCTGCATGAAATTGGCCGCTTGCGAGAACATAATTTCCGTCAAGTTGGCGAAGGGACCGGACAAGCGATAGA CATCGATCATTTCGATCATGATTACCTGCACCTGTTTGTGTGGGATCGTGAGAACCAATGCATGGTAGGTGCTTACCGTC TTGGATTAGTTGATCAATTATTGGCGAAATATGGCGTAGAAGGATTGTATTCGCGCACCTTGTTCAACTATGACCAACGC TTTCTCGATCAAATGGGCAAGTCGATTGAAATGGGTCGTTCTGTGATTGCCGAGCAATATCAAAAAAGCATGAGTGCCCT ACTCTTACTCTGGAAAGGCATAGCGACTTTTGTTCATCAACATCCTGAATACACGCACTTATTTGGCCCAGTGAGCATCA GCAACGATTACAGCCATACCGCGCGTCAATTATTGGCACAATCGATGACCCTACACCACTACGACAACGACTGCGCCGAA TACGTCACTCCGTCAAACCCACTGCCAGAAACCAACTTAAACTGGAATACCAGCATGCTAACCGCATTGGGAGATTTACA GTTGCTATCTCGCGTGATCGCTCGAATTGACGAAGGCAAAGGCGTTCCGGTATTACTGCGCCAATATTTGAGTTTGAATG GTAAGTTGGTGTGTTTTAACGTCGATCCGGCATTTAACAACGCACTGGATGGATTGATTATGGTGGATTTACGCGATGTA CCGGAGAAAACGCTGGCACGTTATATGGGCAGTGAGAACGCACGCGAGTATTTAGCTATGAACAATTAA Protein sequence : MDSSTPFRLPRKTPFGIGENVAEWATGLSQLDKFYAQRPVNTDTKTFLRFTLDILGIDYRIAHGSLDAVPKQGATVIVAN HPLGCVEGVILAELLLMVRDDIQILANQYLKTVPELDQLFIGVDVFEGKDAVKSNMKALRAANKHLANDGLLLVFPAGEV SQLVDAKQQRLEDKEWSRSVSALIRKNKAATVPVFICGQNSKRFYMAGKIHPLLRTLMLGRELLNKSAKTIELSFGEAIK FKELNNLNDDQIVNYLRLNTYLLNRDVSATQQTVSDNDLLPIAAGLPIGQLLEELHNLPAETQLLQSGEFDVYCASAQQI PSLLHEIGRLREHNFRQVGEGTGQAIDIDHFDHDYLHLFVWDRENQCMVGAYRLGLVDQLLAKYGVEGLYSRTLFNYDQR FLDQMGKSIEMGRSVIAEQYQKSMSALLLLWKGIATFVHQHPEYTHLFGPVSISNDYSHTARQLLAQSMTLHHYDNDCAE YVTPSNPLPETNLNWNTSMLTALGDLQLLSRVIARIDEGKGVPVLLRQYLSLNGKLVCFNVDPAFNNALDGLIMVDLRDV PEKTLARYMGSENAREYLAMNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0489 | NP_230143.1 | hemolysin | Not tested | VSP-2 | Protein | 0.0 | 69 |
