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Name : VPBB_2858 (VPBB_2858) Accession : YP_007276479.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : Thiamin biosynthesis protein ThiC Function : - COG functional category : - COG ID : - EC number : - Position : 3213224 - 3215164 bp Length : 1941 bp Strand : - Note : Equivalent to RIMD VP3027 thiamin biosynthesis protein ThiC DNA sequence : ATGTCGAGTCGCAAACAAGCGAGACTGGAAGCAAAACAGTTTATTGATACTCTCTCGGTACAGCCGTACCCAAACTCAAC CAAAGTGTATGTAGAGGGTTCTCGTCCTGACATCCGAGTGCCAATGCGTGAAATTTCTTTGGCTGATAGCCTAATTGGTG GCACCAAAGAGGCTCCAATTTTTGAGCCGAATGAGCCTGTACGTGTTTATGACACCTCTGGTGTGTATACCGACCCAGAT TACTCTATCGACCTTTATAGTGGCTTACCAAAGCTTAGAGAGGGGTGGATTGAAGAACGCAATGATACTGAAATCCTTGA AGATGTGAGCTCTGTTTACGCAAAAGAGCGTCTTGACGATGAAACCTTAGATGATTTGCGTTATGGCAACTTACCACGTA TTCGACGAGCTAAAGCCGGAAAATGCGTCACTCAACTACACTATGCTCGTAAAGGCATTGTTACTCCGGAAATGGAATAC ATTGCACTGCGTGAGAACATGGGTCGCGCTAAATATCGCGATGACGTGCTGACTCAGCAGCATCCTGGTCAAAGCTTCGG TGCAAATCTACCTAAAGACATTACTGCAGAATTCGTTCGTAAAGAAGTCGCAGAAGGTCGCGCCATCATTCCTTCGAATA TCAATCATCCAGAATCTGAACCAATGATTATTGGCCGTAACTTCTTAGTTAAGGTGAATGCCAATATTGGTAACTCATCG GTCACGTCTTCAATCGAAGAAGAAGTGGAGAAACTTGTCTGGGCGACACGCTGGGGTGGCGATACCGTGATGGACCTTTC TACCGGCCGCAACATTCACGAAACTCGCGAATGGATTTTACGCAATAGCCCGGTGCCAATTGGTACGGTTCCTATGTATC AGGCTTTGGAGAAAGTAAATGGCATTGCTGAGAACCTGAATTGGGAAGTCATGCGTGACACGTTAATCGAACAAGCAGAG CAGGGCGTTGATTACTTTACTATCCATGCGGGTTTACTACTTCGCTATGTTCCAATGACGGCGAAACGAGTGACGGGGAT TGTTTCGCGTGGTGGCTCGATTATCGCTAAGTGGTGTCTAGCGCATCACCAAGAAAGCTTCTTATACACCCATTTCCGCG AGATCTGTGAAATTTGTGCGAAGTACGATGTCGCTCTATCTCTTGGTGATGGCTTGCGTCCTGGCTCGGTTGCAGACGCG AACGATGAAGCGCAATTCGCAGAGCTGCGTACGCTCGGCGAGTTGACTAAAATCGCATGGGAATATGATGTGCAGGTCAT CATTGAAGGCCCTGGCCATATTCCAATGCATATGATTAAAGAAAATATGGACCAACAGTTGGAACACTGTCATGAAGCGC CGTTCTACACCTTGGGTCCTCTAACGACAGATATAGCTCCGGGTTATGACCATATTACATCCGGTATTGGCGCGGCGATG ATTGGTTGGTATGGCTGCGCTATGTTGTGTTACGTGACCCCTAAGGAGCACTTGGGGCTTCCAAATAAAGAAGACGTTAA AACCGGTATGATCACCTACAAGCTAGCTGCGCATGCTGCGGATTTAGCAAAAGGGCATCCTGGAGCACAAGTTCGTGACA ATGCTTTATCAAAGGCACGTTTTGAATTCCGCTGGGAAGATCAATTTAACCTCGCTTTAGACCCCGATACCGCACGTGCA TTTCATGATGAAACGCTGCCGCAAGAGTCTGGAAAAGTAGCGCACTTCTGCTCAATGTGCGGCCCTAAATTCTGCTCAAT GAAGATTTCTCAAGAAGTCAGAGAGTATGCCAAAGATACAGAGCAAGTTGCCGCGGATCAGGCGATTTCTATCAAGATGT TAGATGACCCGCTGGAAGGCATGCGTAAGAAGTCTGAAGAGTTTCGTGCGACAGGCTCAGAGCTTTATCACCCAGCCGTG CACGCCGAGGCGGATGAGTAA Protein sequence : MSSRKQARLEAKQFIDTLSVQPYPNSTKVYVEGSRPDIRVPMREISLADSLIGGTKEAPIFEPNEPVRVYDTSGVYTDPD YSIDLYSGLPKLREGWIEERNDTEILEDVSSVYAKERLDDETLDDLRYGNLPRIRRAKAGKCVTQLHYARKGIVTPEMEY IALRENMGRAKYRDDVLTQQHPGQSFGANLPKDITAEFVRKEVAEGRAIIPSNINHPESEPMIIGRNFLVKVNANIGNSS VTSSIEEEVEKLVWATRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVNGIAENLNWEVMRDTLIEQAE QGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCLAHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSVADA NDEAQFAELRTLGELTKIAWEYDVQVIIEGPGHIPMHMIKENMDQQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAM IGWYGCAMLCYVTPKEHLGLPNKEDVKTGMITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWEDQFNLALDPDTARA FHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDTEQVAADQAISIKMLDDPLEGMRKKSEEFRATGSELYHPAV HAEADE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 72 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 72 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 68 |
