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Name : VPBB_2740 (VPBB_2740) Accession : YP_007276365.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : - COG ID : - EC number : - Position : 3072596 - 3074731 bp Length : 2136 bp Strand : - Note : Equivalent to RIMD VP2890 lysine decarboxylase DNA sequence : ATGAATATTTTCGCTATCTTGAACCACATGGGTGTGTTCTTTAAAGAAGAGCCAGTTCGTCAACTTCACGCTGCTCTTGA GAAAGCGGGCTACGAAGTGGTTTACCCAGTAGATGATAAAGACTTGATCAAAATGATTGAGATGAACCCACGCATTTGCG GTGTGCTGTTCGACTGGGATAAATACTCACTAGAGCTATGTGAACGTATTAGCCAAATCAACGAAAAACTGCCTGTTCAC GCATTTGCTAACGAACAGTCTACTCTAGATATTTCACTAACAGACCTACGTCTAAACGTGAGCTTCTTCGAGTACGCTTT AGGTATGGCTGACGACATCGCTATCAAAATCAACCAAGCGACAGAGGCATACAAAGATGCCATCATGCCTCCATTCACTA AAGCGCTATTCAAATACGTAGAAGAAGGTAAATACACCTTCTGTACTCCAGGTCACATGGGTGGTACTGCGTTCCAGAAA AGCCCTGCTGGTAGCATCTTCTATGATTTTTACGGTCCAAACACATTCAAAGCGGACGTATCAATCTCAATGCCTGAACT AGGTTCTCTACTAGACCACTCAGGTCCACATAAAGATGCAGAAGAATACATCGCACGTACCTTCAATGCAGACAGTTCTT ACATCGTAACTAACGGTACGTCTACATCGAACAAAATCGTTGGTATGTACTCAGCGCCTGCGGGCAGCACAGTACTGATT GACCGTAACTGTCACAAATCTCTGACTCACCTAATGATGATGAGCGACGTGACACCAATCTACTTCCGCCCAACTCGTAA CGCATACGGCATCCTTGGTGGTATTCCACAAAGCGAATTCAGCCGCGATGTCATTGCAGAGAAAGTGGCGAAAACACCAG GTGCAACAGCGCCAAGTTACGCAGTAGTGACTAACTCAACTTACGATGGTCTGTTGTACAACACACAATTCATCAAAGAG TCGCTAGACTGTAAACACATCCACTTCGACAGTGCTTGGGTGCCTTACACTAACTTCAACCCAATTTATGAAGGTAAATG TGGTATGAGTGGTGAAGCGATGCCAGGCAAAGTGTTCTACGAGACACAATCAACACACAAACTGTTGGCTGCGTTCTCAC AAGCTTCAATGATTCACGTGAAAGGCGACTTTGATAAAGAATCTTTCAACGAAGCATTCATGATGCACACTTCAACTTCA CCTCAGTACGGCATTGTTGCTTCTACTGAAACAGCAGCGGCAATGATGCGCGGCAACACTGGTAAGAAGTTGATGCAAGA CTCTATCGATCGCGCAATTCGCTTCCGTAAAGAGATCAAACGCCTAGAAGCAGAAAGTGACAGCTGGTTCTTCGATGTAT GGCAACCAGAAAACATCGATACCACAGAATGTTGGAAACTAGACCCTAGCGATACATGGCACGGCTTCAAGAACATGGAT GACAACCACATGTATCTTGACCCAATCAAAGTCACGCTACTGACTCCAGGGATGAACAAAGAAGGCGAACTAGAAGAATC AGGTATTCCTGCTTCGCTGGTGGCTAAATTCCTAGATGAGCGCGGCATCGTGGTTGAGAAAACAGGCCCATACAACTTGT TGTTCCTATTCTCAATCGGTATCGACAAATCAAAAGCAATGCAATTGCTACGCGGTCTGACTGAATTTAAACGTGGCTAC GACTTGAACCTAACCATCAAGAGCTTCCTACCTTCACTATATAACGAAGACCCAAGCTTCTATGAAGGCATGCGCGTTCA AGAACTAGCACAAGCAATTCACGACCTAACTAAGAAATACAATCTACCAGAGCTAATGTACAAAGCGTTCGATGTTCTTC CAGAAATGAAAGTAACACCACACGCAGCATGGCAAGAAGAGCTTCGCGGTAACGTAGAAGAAATCAAACTGGAAGAAATG GTTGGTCGCGTAAGTGCGAACATGATCCTTCCTTACCCTCCAGGCGTGCCACTAGTACTTCCTGGTGAAATGGTGACTCA AGAGTCTCGCCCTGTGCTGGACTTCCTCGAGATGCTTTGTGAGATCGGTGCGCATTACCCTGGTTTCGAAACCGACATCC ACGGTCTGTACCAACAAAAAGATGGTAGCTACACCGTAAAAGTATTGAAGAACTAA Protein sequence : MNIFAILNHMGVFFKEEPVRQLHAALEKAGYEVVYPVDDKDLIKMIEMNPRICGVLFDWDKYSLELCERISQINEKLPVH AFANEQSTLDISLTDLRLNVSFFEYALGMADDIAIKINQATEAYKDAIMPPFTKALFKYVEEGKYTFCTPGHMGGTAFQK SPAGSIFYDFYGPNTFKADVSISMPELGSLLDHSGPHKDAEEYIARTFNADSSYIVTNGTSTSNKIVGMYSAPAGSTVLI DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFSRDVIAEKVAKTPGATAPSYAVVTNSTYDGLLYNTQFIKE SLDCKHIHFDSAWVPYTNFNPIYEGKCGMSGEAMPGKVFYETQSTHKLLAAFSQASMIHVKGDFDKESFNEAFMMHTSTS PQYGIVASTETAAAMMRGNTGKKLMQDSIDRAIRFRKEIKRLEAESDSWFFDVWQPENIDTTECWKLDPSDTWHGFKNMD DNHMYLDPIKVTLLTPGMNKEGELEESGIPASLVAKFLDERGIVVEKTGPYNLLFLFSIGIDKSKAMQLLRGLTEFKRGY DLNLTIKSFLPSLYNEDPSFYEGMRVQELAQAIHDLTKKYNLPELMYKAFDVLPEMKVTPHAAWQEELRGNVEEIKLEEM VGRVSANMILPYPPGVPLVLPGEMVTQESRPVLDFLEMLCEIGAHYPGFETDIHGLYQQKDGSYTVKVLKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 76 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_2740 | YP_007276365.1 | lysine decarboxylase | VFG1670 | Protein | 0.0 | 64 |
