Gene Information

Name : VPBB_0248 (VPBB_0248)
Accession : YP_007273944.1
Strain :
Genome accession: NC_019955
Putative virulence/resistance : Virulence
Product : UDP-glucose dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 268967 - 270133 bp
Length : 1167 bp
Strand : +
Note : Equivalent to RIMD VP0236 nucleotide sugar dehydrogenase

DNA sequence : 
ATGAAAATAGCTGTCGCAGGTACCGGCTACGTGGGGCTTTCTAATGCAATGTTGTTAGCTCAAAACCATGAAGTGGTCGC
ACTAGATATTGTTCCTGAAAAAGTTGAATTGCTAAACAAAAAGCAATCTCCAATTGTTGATGCTGATATTGAACATTTCC
TCGAAAACAGGGAGCTAAACTTCATTGCAACAACAGATAAGCAGAAAGCTTATAAAGGCGCTGAATATGTTGTGATCGCA
ACGCCAACGGATTATGACTCAGTCACGCATTACTTTAATACTTCTTCTGTTGAAGCCGTGATTAAAGATGTTATGTCCAT
TAATCCAGATGCAGTCATGGTGATTAAGTCTACTGTTCCTGTTGGCTATACTGCTCGCATTAAGGAAGAGTTGGGATGTA
AAAATGTCATCTTCTCCCCTGAGTTTTTGCGAGAAGGCAAAGCGCTCTACGACAATCTTCATCCATCTCGTATCATTGTT
GGTGAACGCAGTGAGCGAGCAGAGGTGTTCGCTGGGCTATTGGTTGAAGGTGCAGTTAAAGAAGATATTCAAGTTCTGTT
TACTGACTCTACAGAAGCTGAAGCAGTAAAACTATTTTCAAACACCTACCTTGCTATGCGTGTAGCATACTTTAATGAGC
TGGATTCTTACGCAGAAGCTCATGGCTTGGACGCTCGTCAAATTATTGAAGGTGTTGGCTTAGACCCTCGTATTGGTAAT
CATTACAATAACCCATCATTTGGTTACGGTGGTTATTGCTTACCAAAAGACACTAAACAGCTTTTAGCCAATTACCAAGA
TGTACCAAACAACATCATTGGTGCGATTGTCGATGCGAACCGCACTCGTAAAGATTTTGTGGCTGAAGCTATCCTTAAGC
GCAAACCAAAAATTGTCGGTATTTACCGTCTAATCATGAAGTCAGGTTCGGATAACTTCCGTGCATCTTCTATTCAAGGC
ATCATGAAGCGTATCAAAGCGAAAGGTGTTGAGGTCGTAGTTTACGAACCTGTGCTCAAAGAAGAAGATTTCTTTAACTC
CCAAGTGATTAAAGATCTGAATGAATTCAAACAAAGTGCGGATGTGATAGTTTCTAACCGCATGGTAGAAGAGTTAGCAG
ATGTAGCGGATAAAGTTTACACGCGCGACTTGTTTGGTAGCGACTAA

Protein sequence : 
MKIAVAGTGYVGLSNAMLLAQNHEVVALDIVPEKVELLNKKQSPIVDADIEHFLENRELNFIATTDKQKAYKGAEYVVIA
TPTDYDSVTHYFNTSSVEAVIKDVMSINPDAVMVIKSTVPVGYTARIKEELGCKNVIFSPEFLREGKALYDNLHPSRIIV
GERSERAEVFAGLLVEGAVKEDIQVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDSYAEAHGLDARQIIEGVGLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYQDVPNNIIGAIVDANRTRKDFVAEAILKRKPKIVGIYRLIMKSGSDNFRASSIQG
IMKRIKAKGVEVVVYEPVLKEEDFFNSQVIKDLNEFKQSADVIVSNRMVEELADVADKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-92 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VPBB_0248 YP_007273944.1 UDP-glucose dehydrogenase VFG0963 Protein 6e-98 53