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Name : VPBB_0247 (VPBB_0247) Accession : YP_007273943.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Virulence Product : Nucleoside-diphosphate sugar epimerase dehydratase Function : - COG functional category : - COG ID : - EC number : - Position : 266912 - 268810 bp Length : 1899 bp Strand : + Note : Similar to RIMD VP0235 DNA sequence : ATGGTCAGTGTTCTGATTGACGTTATGTTGATCTTTATGGCTTTTCATTTGGCAATCTTTGTTCGTTCTGGAGATACCAA TTACTTCACGTATCCAGTAGTCTGGGGTATTCAAATAGGCGTGACAATTGTCACAATTGCTGTTTTTGCTCGACTGGGGC TTTATAGAGCAGTTCTCCGCTACTTAACTTTTCAAGCTCTGTTTGTCGTGACTGCTGGTGCCATTATATCTGCAACGCTT GTTGCAGCTTTAAGTTTCTACATGAGTGACCCATTTCCTAGAACAGTACCTGTTATTTATGCTGCATTTCTTGCTCTTTT TTGTGGTGGCCCTCGCGTTATCGTTCGATCTTTGATTGCACAGAGCTACTCTACACAGAGCAAAGAGGTTCTTATTTATG GCGCGGGCTCCGGTGGTCGACAACTCGCAATGGCATTGAGAAGTAGTGGGGACTATCGTGTAAGAGCTTTTATTGACGGC GATTCAACATTGTGCAATACCATGATTTTAGGCTTACCTGTTATTGCCATTGAAGATGCGATGCCCATCATCAATAAATA CGATGTTTCTCAAGTCTTACTAGCTGTACCTAGTGCTAAACGTTCACGACGTAAAGTCATCCTTGATGAACTTGCTAAGT TACCTGTGGAAGTGCTTACTGTCCCTGATATGACGGATATTGTCTCTGGCAAAGCAAAAATCGATGAGCTGAAAGATGTT GCTATTGAAGATTTACTTGGACGAGATCCTGTTGCTCCACAACAAGTGTTGTTAGAAGCGAATATCAAAGATAAAGTTGT AATGGTTACAGGAGCTGGAGGTTCTATTGGCTCTGAGTTGTGTCGTCAAATCGTAGAGCAGTCTCCGAAATCTATTATTT TATTTGAATTATCTGAATTTGGTTTATATCAAATTGATCGTGAACTAAATCAACTTAAGGTTGAAAAAGGGTTAACTTGC GACATTGTTCCTTTGTTGGGTTCAGTTCAGCGTCAACATCGTTTAGAAACCACGATGTCTTCTTTTAAAGTCCAAACGGT ATATCATGCAGCAGCATACAAACACGTTCCATTAGTTGAATTTAACGTAATTGAGGGTGTGCGTAATAATATTTATGGGA CTTATTATACTGCATGTGCTGCGATTAAAGCCGGTGTTGAATCATTTGTATTGATCTCAACCGACAAAGCTGTTCGTCCG ACTAACGTAATGGGCACAACTAAACGAATGGCAGAACTTGGCCTACAGGCTCTTGCTGATCAAGAAAATGCAAAACCAAA TGGTACGCGATTTTGCATGGTACGATTTGGTAATGTTCTGGGCTCTTCTGGCTCAGTTATTCCCGTATTCAAAAAGCAAA TTGCATCTGGTGGGCCAGTAACGGTTACTCACCCGGAAATCACTCGTTTCTTCATGACGATTCCAGAGGCAGCACAGTTA GTCATCCAAGCTGGTGCAATGGGGAAAGGTGGGGATGTGTTTGTTTTGGACATGGGAGAGTCAGTAAAAATTACAGACTT AGCATGTAATCTCATTCAACTATCTGGTCTAGAAGTAAAGTCTGAGGCTAATCCTCATGGTGATATTGAGATTCAATTCT CAGGACTTCGACCTGGTGAGAAACTTTATGAAGAGTTGCTTATTGGCGACAATGTAAAACAAACAGCGCATGAGCGAATC ATGACGGCTCATGAGGTTCATTTACCTTTACAAGAGTACGAACTATTGTTGAACGATCTCGATTTCGCCTGCCATAGTAT GGATCACGAGAACATCCGCACATTACTATTAAATGCTCCAACAGGTTTTAATCCTACGGATGGTATTGGCGACTTAGTCT GGAGTCATAACCAATTGGAGTTAAATCTGGTTGATACTGAGCTAGTTGTAAATGAATAG Protein sequence : MVSVLIDVMLIFMAFHLAIFVRSGDTNYFTYPVVWGIQIGVTIVTIAVFARLGLYRAVLRYLTFQALFVVTAGAIISATL VAALSFYMSDPFPRTVPVIYAAFLALFCGGPRVIVRSLIAQSYSTQSKEVLIYGAGSGGRQLAMALRSSGDYRVRAFIDG DSTLCNTMILGLPVIAIEDAMPIINKYDVSQVLLAVPSAKRSRRKVILDELAKLPVEVLTVPDMTDIVSGKAKIDELKDV AIEDLLGRDPVAPQQVLLEANIKDKVVMVTGAGGSIGSELCRQIVEQSPKSIILFELSEFGLYQIDRELNQLKVEKGLTC DIVPLLGSVQRQHRLETTMSSFKVQTVYHAAAYKHVPLVEFNVIEGVRNNIYGTYYTACAAIKAGVESFVLISTDKAVRP TNVMGTTKRMAELGLQALADQENAKPNGTRFCMVRFGNVLGSSGSVIPVFKKQIASGGPVTVTHPEITRFFMTIPEAAQL VIQAGAMGKGGDVFVLDMGESVKITDLACNLIQLSGLEVKSEANPHGDIEIQFSGLRPGEKLYEELLIGDNVKQTAHERI MTAHEVHLPLQEYELLLNDLDFACHSMDHENIRTLLLNAPTGFNPTDGIGDLVWSHNQLELNLVDTELVVNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-81 | 45 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 9e-77 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VPBB_0247 | YP_007273943.1 | Nucleoside-diphosphate sugar epimerase dehydratase | VFG0029 | Protein | 8e-115 | 48 |
