|
Name : VPBB_2425 (VPBB_2425) Accession : YP_007276056.1 Strain : Genome accession: NC_019955 Putative virulence/resistance : Unknown Product : Transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 2713709 - 2715703 bp Length : 1995 bp Strand : - Note : Equivalent to RIMD VP2605 transketolase 1 DNA sequence : ATGTCGTCTCGTAAACATCTTGCCAATGCAATTCGTGCTCTAAGCATGGATGGTGTTCAACAAGCTAACTCTGGCCACCC AGGCGCACCTATGGGTATGGCTGATATCGCTGAAGTTCTTTGGCGCTCTCACCTAAACCACAACCCAGCTAACCCAGAGT GGGCAGATCGCGACCGTTTTGTACTTTCAAACGGCCACGGTTCTATGCTGATCTACTCTCTACTGCACTTGAGCGGTTAC GAGCTATCTATTGATGATCTGAAAAACTTCCGTCAGCTTCACTCTAAGACTCCAGGTCACCCAGAGTACGGCTACGCACC AGGCATCGAAACGACAACAGGCCCTCTAGGTCAAGGTATCACGAACGCTGTTGGTATGGCTCTAGCAGAAAAAGCGCTAG CAGCACAATTCAACAAAGAAGGCCACGACATCATTGACCACTTCACTTATGTGTTCATGGGTGATGGCTGTCTGATGGAA GGTATCTCGCATGAGGCATGTTCTCTTGCTGGTACTCTAGGCCTAGGTAAACTGATCGCATTTTGGGATGACAACGGCAT CTCTATCGATGGTCACGTTGAAGGTTGGTTCTCTGACGATACACCTAAGCGTTTCGAAGCTTACGGTTGGCACGTAATCC CAGCAGTAGATGGCCACGATTCTGAAGCAATCAACGCAGCGATTGAAGCTGCAAAAGCAGACCCTCGTCCTACGCTAATT TGTACGAAGACTATCATCGGTTTTGGTTCTCCAAACAAATCGGGCTCTCACGACTGTCACGGTGCACCACTAGGTGCGGA AGAAATCGCAGCAGCACGTGAATTCCTAGGTTGGGAACACCCAGCATTTGAAATCCCTGCTGATGTATACGCAGAGTGGG ATGCAAAAGCAGCTGGCGCTGAAAAAGAAGCGGCGTGGAACGCGAAGTTCGAAGCATACGTAGCGGCTTACCCAACAGAA GCAGCAGAGCTTAAGCGTCGTCTAAACGGCGAACTTCCTGCAGAGTGGGAAGAGAAAGCAAACCAAATCATTGCTGATCT TCAAGCAAACCCAGCAAACATTGCGTCACGTAAAGCATCTCAAAATGCTCTAGAAGCTTTCGGTCAAATGCTACCAGAAT TCATGGGCGGCTCTGCTGACCTAGCACCTTCTAACCTAACCATGTGGTCGGGTTCTAAGTCTCTAGAAGCGAACGACTTC TCTGGTAACTACATCCACTACGGTGTACGTGAATTTGGTATGACTGCTATTATGAACGGTATCGCACTACACGGCGGTTT CGTTCCTTACGGCGCAACATTCCTAATGTTCATGGAATACGCTCGTAACGCAATGCGTATGGCTGCTTTGATGAAAATTC AGAACATCCAAGTGTACACACACGATTCTATCGGTCTTGGCGAAGATGGCCCAACTCACCAACCAGTTGAGCAAATGGCG TCTCTACGTTTGACTCCAAACATGAACACATGGCGTCCATGTGACCAAGTTGAGTCTGCTGTAGCATGGAAACTAGCGAT TGAACGTAAAGATGCACCAACAGCACTTATCTTCTCTCGTCAAAACCTAGCGCAACAACCACGCAGCGCTGAGCAAGTTG CAGACATCGCGAAAGGTGCTTACATCCTGAAAGACAGCGATGGCAAACCTGAGCTAATCCTAATCGCAACAGGTTCTGAA GTTGAGTTAGCAGTGAAAGCCGCTGAACAACTAACAGCAGAAGGTAAGAAAGTACGCGTGGTTTCAATGCCATCAACAGA TGCATTCGACAAACAAGACGCAGCTTACCGTGAAGCAGTTCTACCATCAGACGTAACAGCACGTATCGCTATTGAAGCGG GCATCGCAGACTTCTGGTACAAGTACGTTGGTTTCGACGGTCGCATCATCGGTATGACAACATTCGGTGAATCTGCACCT GCTGACCAGTTGTTCGAAATGTTTGGTTTCACTGTAGAAAACGTAGTGAACACAGCAAAAGAACTACTAGCGTAA Protein sequence : MSSRKHLANAIRALSMDGVQQANSGHPGAPMGMADIAEVLWRSHLNHNPANPEWADRDRFVLSNGHGSMLIYSLLHLSGY ELSIDDLKNFRQLHSKTPGHPEYGYAPGIETTTGPLGQGITNAVGMALAEKALAAQFNKEGHDIIDHFTYVFMGDGCLME GISHEACSLAGTLGLGKLIAFWDDNGISIDGHVEGWFSDDTPKRFEAYGWHVIPAVDGHDSEAINAAIEAAKADPRPTLI CTKTIIGFGSPNKSGSHDCHGAPLGAEEIAAAREFLGWEHPAFEIPADVYAEWDAKAAGAEKEAAWNAKFEAYVAAYPTE AAELKRRLNGELPAEWEEKANQIIADLQANPANIASRKASQNALEAFGQMLPEFMGGSADLAPSNLTMWSGSKSLEANDF SGNYIHYGVREFGMTAIMNGIALHGGFVPYGATFLMFMEYARNAMRMAALMKIQNIQVYTHDSIGLGEDGPTHQPVEQMA SLRLTPNMNTWRPCDQVESAVAWKLAIERKDAPTALIFSRQNLAQQPRSAEQVADIAKGAYILKDSDGKPELILIATGSE VELAVKAAEQLTAEGKKVRVVSMPSTDAFDKQDAAYREAVLPSDVTARIAIEAGIADFWYKYVGFDGRIIGMTTFGESAP ADQLFEMFGFTVENVVNTAKELLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 78 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 68 |
